Rodentibacter caecimuris: FEE42_11725
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Entry
FEE42_11725 CDS
T06473
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00470
D-Amino acid metabolism
rhey00550
Peptidoglycan biosynthesis
rhey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FEE42_11725 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FEE42_11725 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhey01011
]
FEE42_11725 (murD)
Enzymes [BR:
rhey01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FEE42_11725 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhey01011
]
Precursor biosynthesis
Amino acid ligase
FEE42_11725 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
2-Hacid_dh_C
TrkA_N
F420_oxidored
PhnI
Shikimate_DH
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QIA77952
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All DBs
Position
2396059..2397369
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AA seq
436 aa
AA seq
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MNSYQNKTVTIIGLGKTGLSCVDYLNAQQANIRVIDTRENPVGADKLPKNIPLHTGSLNQ
HWLNESDMIVISPGLAVKTPEIQTALSLGVEVVGDIELFCRAATKPIVAITGSNGKSTVT
TLVYEMAKAAGLKVGMGGNIGIPALSLLNQDYDLYVLELSSFQLETTYSLKATAATVLNV
TEDHMDRYVDLEDYRQAKLRIYHQAESAVVNNEDKLTLGGGNNQGKKVVSFAEHDADYDI
KTENGKPCLMVKDEVILPCDEIMLVGRHNYMNALAAAALAQAVGVNLEAVRTALRQFRGL
DHRFQLAYQANGVRWINDSKATNVGSTVAALTGLFVEGKLHLLLGGDGKGADFSELAELI
NQPHIICYCFGRDGAELAKLSPQSYLFETMAQAIEFLRPTLQVGDMVLLSPACASLDQFA
SFEKRGEEFTRLAQLN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttaccaaaataaaaccgttactattattggattgggtaaaacaggtttgtcc
tgtgttgattatcttaacgctcaacaggcaaatatccgtgtaattgatacgcgagaaaac
cccgtcggtgcggataaacttcctaaaaatattccgcttcataccggaagcttaaatcaa
cactggttgaatgaaagcgatatgatcgtcatcagtccggggcttgcggtaaaaacgccg
gaaattcagaccgcactttcattaggtgtcgaagtggtgggcgatattgaattattttgt
cgcgcagccacaaaacctattgtggcgataacgggttcaaatggaaaaagtacggtgact
acgctagtttacgagatggcgaaagcagcggggctgaaagtaggaatgggggggaatatt
ggtattccggcactttctttactgaatcaggattatgatctttacgtattggaattatcc
agttttcaattggaaacaacatacagtttaaaagctaccgcagcgactgttttgaatgtg
acggaagatcatatggatcgttatgtggatttagaggattatcgtcaggctaagttgcgt
atttatcatcaggctgaaagcgcagtggtgaataacgaagacaaattgactttaggtggg
ggtaacaatcaagggaaaaaggttgtttcttttgccgaacatgatgcggattatgatatt
aaaaccgagaatggcaaaccgtgtttaatggtgaaagatgaggtgattttaccttgtgat
gaaattatgctggttggtcgtcataattatatgaatgcccttgcagcagcggcattagcg
caagccgttggggtaaatttagaggcagttcgtaccgcacttcgacaatttagaggactg
gatcaccgttttcaattagcctatcaggcaaatggtgtgcgttggattaatgattctaag
gcaaccaatgtgggaagtaccgtggccgcactgacaggtttatttgtcgaaggtaaatta
cacttattattaggtggtgatggaaaaggcgctgatttttccgaattagccgagctgatt
aatcaacctcatattatttgttattgttttgggcgtgacggggcggaactggcaaaactt
tctccgcaaagctatttatttgaaacgatggcgcaagcgattgagttcttgcgaccgaca
ttgcaagtaggcgatatggttctattatcaccggcttgcgcaagtcttgatcaattcgct
tcttttgaaaagcgtggtgaagaatttactcgtttagcacaattaaattaa
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