Rodentibacter caecimuris: FEE42_12000
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Entry
FEE42_12000 CDS
T06473
Symbol
ompA
Name
(GenBank) porin OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhey02000
]
FEE42_12000 (ompA)
Transporters [BR:
rhey02000
]
Other transporters
Pores ion channels [TC:
1
]
FEE42_12000 (ompA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
QIA78003
LinkDB
All DBs
Position
2456565..2457635
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AA seq
356 aa
AA seq
DB search
MKKTAIALVVAGLAATSVAQAAPQENTFYVGAKAGWASFHDGLKRVDSKYVGHENGFGVN
RNSVTYGVFGGYQVLNRDNLGLAVELGYDDFGRAKFSKGEKVVSKHTNHGAHLSLKGSYE
VLEGLDLYGRAGAALVRSDYKNAKGVAEEGSVWGTRAHSLKVSPVFAAGVEYALPSLPEL
ALRVEYQWLTSVGKDNKIAEDADYTPWIGSVTAGLSYRFGQGAPVVAPEVVSKTFNLNSD
VTFAFGKANLKPQAQATLDGIYGEIAQVNSAKVAVAGYTDRIGKDAANLKLSQRRADSVA
NYLVAKGVAAQDITATGYGEANPVTGATCDAVKGRKALIACLAPDRRVEIAVNGTK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactgcaatcgcattagtagtagctggtttagcagcaacttcagtagctcag
gcagctccacaagaaaatactttctatgttggtgctaaagcaggttgggcatctttccat
gatggtttaaaacgagtcgactcaaaatatgttggtcacgaaaatggtttcggtgttaac
cgtaactctgtaacttacggtgttttcggtggttaccaagttttaaaccgtgacaactta
ggtttagcggtagaattaggttacgatgattttggtcgtgctaaattctctaaaggcgaa
aaagttgtttcaaaacacactaaccacggtgcacacttaagcttaaaaggaagctatgaa
gtgttagaaggcttagacctttatggtcgtgctggtgcggcattagttcgttcagactat
aaaaatgctaagggtgttgcagaggaaggtagcgtttggggtactcgtgctcacagctta
aaagtgtctccggtatttgcagcaggtgttgagtatgcattaccttcattaccagagtta
gcattgcgtgttgaataccaatggttaacttctgttggtaaagataacaaaattgcagaa
gatgcagactatactccgtggatcggttctgtaactgctggtttatcttaccgtttcggt
caaggtgctccggttgttgcgcctgaagttgtaagcaaaactttcaacttaaattctgat
gttactttcgctttcggtaaagcaaacttaaaaccacaagcacaagcaactttagacggt
atctatggtgaaatcgcacaagtaaatagcgctaaagtagccgttgctggttacacagac
cgtatcggtaaagatgcagcaaacttaaaattatcacaacgtcgtgcagattctgtagct
aactacttagttgctaaaggtgttgcagcacaagacatcactgctactggttatggtgaa
gcaaatcctgttaccggtgcaacttgtgacgcggttaaaggtcgtaaagcgcttatcgct
tgcttagcgccagaccgtcgcgttgaaatcgcagttaacggtactaaataa
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