Rodentibacter caecimuris: FEE42_12420
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Entry
FEE42_12420 CDS
T06473
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FEE42_12420
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhey01007
]
FEE42_12420
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhey03016
]
FEE42_12420
Enzymes [BR:
rhey01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
FEE42_12420
Amino acid related enzymes [BR:
rhey01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FEE42_12420
Transfer RNA biogenesis [BR:
rhey03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FEE42_12420
Prokaryotic type
FEE42_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
ABC_tran_CTD
Cytochrom_B562
tRNA-synt_1f
ADIP
Flavodoxin_4
Motif
Other DBs
NCBI-ProteinID:
QIA78070
LinkDB
All DBs
Position
2557975..2560788
Genome browser
AA seq
937 aa
AA seq
DB search
MTKNFQMADRFEASAVEQALYKHWEEQGYFKPNENPNVPSYCIAIPPPNVTGSLHMGHAF
QQTLMDTLIRFNRMEGHNTLWQSGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKI
WDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVKEVFVRLHEEGLIYRGKRLVN
WDPKLRTAISDLEVENRDEKGFMYHVRYPFVDKSETFGGGYMHIATTRPETILADGCLAV
HPDDERYKDVIGKMVHVPMTDRIIPVVADPYPDPEFGTGCVKITPAHDFNDYEVGKRHDI
EIINLMNPDATLNDNAPERYRGLDRFEARKRIVADLEAEGYLEKIEPHELKRPYGDRSGV
VIEPYLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWG
HRIPAWYDEAGNIYVARSEEEARQKHNLPADLPLTQDEDVLDTWFSSGLWTFSTLGWPEQ
TKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQG
QKMSKSKGNVLDPIDMIDGISLEALLEKRTGNMMQPQLAEKIAKSTTKQFPEGIAPHGTD
ALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLMNMNALELGEGEKTFRLAD
RWIQAEFNNTVKTFREALSQYRFDMAANALYEFTWNQFCDWYLELTKPVFAQGSVAEKRG
ACDTLINVLEKLLRLAHPIIPFITEEIWQKVKGFAGVEGDTIMLQPFPQYDEALENPTAL
AQIGWLKEVIVAVRNIRAESNIAPSKPLELLIRNTQESDCQILAENDRLLKAMAKLERVQ
AIPAGSEAPLSVAKLVGNMEVLVPMAGFINKEAELARLTKEIDKLTNEVKRIEGKLSNEA
FVAKAPEAVINKEREKMAEYQAGLEKLQTQYRAIEAL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaacttccaaatggcagatcgctttgaggcatctgcggtagaacaagccctg
tataaacactgggaagaacaaggttattttaaaccgaatgaaaatccgaatgtgccgagt
tactgtattgcgattccgccgccgaatgtaacggggagcttgcatatggggcacgctttc
cagcaaaccttaatggatactttgatccgttttaaccgtatggaagggcataataccctg
tggcagtcgggtactgaccacgcaggtatcgccacgcaaatggtggtggagcgtaaaatt
gctgccgaagagggcaaaacccgccacgattacgggcgtgaggcgtttatcgacaaaatc
tgggattggaaagcctattcaggcggaacaatcagccagcaaatgcgtcgtttaggtaac
tctatcgactgggatcgtgaacgctttacaatggacgaaggtttatccaatgcggtaaaa
gaggtctttgttcgcttgcacgaagaggggctgatttaccgtggcaaacgcttggtaaac
tgggatccgaaactgcgtaccgcgatttccgatttggaagtggaaaaccgtgatgaaaaa
ggctttatgtatcacgttcgctatccgtttgtggataaatccgaaacctttggcggcggt
tatatgcacattgcgaccacccgtcctgaaacgattttagcggacggctgtttggcggtt
caccctgatgatgagcgttacaaagatgtgatcggtaaaatggtacacgtcccgatgacc
gaccgtatcattccggtggtggctgacccttacccagaccctgaatttgggacgggctgt
gtgaaaatcacgccggcgcacgatttcaacgactacgaagtgggcaagcgccacgatatt
gaaatcatcaatttaatgaaccccgatgccaccttaaacgacaacgctcctgagcgttat
cgtggtttggatcgctttgaggcacgtaaaagaattgttgctgatttagaagcggaaggt
tatttagaaaaaatcgaaccgcacgagttaaaacgcccttacggcgaccgctccggcgta
gtcattgagccgtatttaacggatcaatggtatgtgagcgtcaaaccgcttgcggaagtg
gcgactaaagcggtggaagacggcgaaatccaatttgtgccgaagcagtacgaaaatctc
tacttctcgtggatgcgggatattcaagattggtgtatttctcgccagttatggtggggg
catcgtattccggcgtggtatgacgaagcgggtaatatctacgttgcccgtagtgaagaa
gaagcccgccaaaaacataatctgccggcggatttacctttaacccaagatgaagacgta
ctggacacgtggttctcatcggggctatggacgttctccacgctcggctggccggaacaa
accaaagagctgaaaatgttccacccgaccgatgtgttaatcaccggctttgacatcatt
ttcttctgggttgcccgaatgattatgttcacgatgcacttcatcaaggacgaaaacggc
aaaccgcaagtgccgttcaaaaccgtctatgtaacggggttaatccgtgatgaacaaggg
cagaaaatgtcgaagtctaaggggaacgtgcttgacccgattgatatgattgacggtatc
agccttgaggcgttattggaaaaacgcaccggtaatatgatgcagccgcaactggcggaa
aaaattgctaagtccaccactaagcagttcccagagggaattgctccgcacggcacggac
gcgttacgctttaccttggctgcgttagcgagcaacggtcgggacatcaactgggatatg
aaacgccttgagggctaccgcaatttctgcaacaaattgtggaacgccagccgctatgtg
ctgatgaatatgaatgcgctcgaattgggcgagggcgagaaaaccttcagattggcggat
cgttggattcaggcggaatttaataacacggtgaaaaccttccgtgaggcacttagccaa
taccgtttcgatatggcagccaatgccctgtatgaatttacttggaatcaattctgcgac
tggtatttggagctgaccaaaccggtatttgcgcaaggttcggtggcagaaaagcgtggg
gcgtgcgacacgttaatcaatgtattggaaaaattgttgcgtttggctcatccgattatt
ccgtttatcaccgaagaaatttggcagaaagtgaaaggctttgccggcgtggaaggcgac
actattatgttgcaaccgttcccgcaatatgacgaagcccttgaaaatccgaccgcactt
gcgcaaatcggctggttgaaagaggtgattgtcgcggtacggaatatccgcgcggaaagc
aatattgcgccaagtaaaccgttagaattgctcattcgcaatacccaagaaagcgattgc
caaattttggcggaaaacgaccgcttgctaaaagcaatggcgaagctggagcgcgtacaa
gcaattccggctggttcggaagcgccgctttccgttgccaaattggtcggcaatatggaa
gtgcttgtgccaatggcgggctttatcaacaaagaggcagagcttgcccgtttaaccaaa
gagatcgacaagctcaccaatgaggttaaacgcattgagggtaaactcagtaacgaagcc
tttgttgccaaagcaccggaagcggtaatcaacaaagagcgtgaaaaaatggcagagtat
caagcgggacttgagaaattgcagactcaataccgagcgattgaagcattataa
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