Rodentibacter caecimuris: FEE42_12530
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Entry
FEE42_12530 CDS
T06473
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FEE42_12530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhey02000
]
FEE42_12530
Transporters [BR:
rhey02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FEE42_12530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QIA78090
LinkDB
All DBs
Position
2588032..2589588
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AA seq
518 aa
AA seq
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MNNFFSASLKSAVIFSVIFTLSGCDNENLNNPTLSQSQSESTISIEKPTVQHNREKLIRG
IKFDAVLDPWQVKEEEQLSLIRDLFEGLTAYDAQGNIVPAAAESWQTQDNQNWTFILREG
LKWSNGMPLTAQDFVLSWQALSQSESPFKFYLQYLNLKGAKPVLEKKQPLTNLGISAEND
RTLVITLDKPTPYLPEMLAHIALLPQYRDLDLFVSNGAYTLSLRDEKGVHLVKNPYYWQK
DRTSFKQVDYVPYNSKPLDELDIIWSPPKKTGNIQYFPQLCGYFYEFNLRDPKLANPLVR
KAIASLISVSAIINNEMPDSIPSSYFLPKAMLQGQDSRWEPVLAEQLLVQSHITEKKPLI
LRLTHDDTLLHQNIANRLARQLSESDLLRVEDEPMSWQQLQEKRNKGDFQLIRSGWCGDF
NHPMAFLGLFYSKSPDNKSGYTNAGYDQLFEQALKSTSEKERSEIYLKLSEIIQQENLVL
PLFQYTTAVYISPSVMGVQKNSIGAIYSKHLWRKVEVE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttttctctgcaagtctgaaaagtgcggttattttttccgttatttttacg
ctaagcggttgtgataacgagaatctgaataatccaacgctatctcaatctcagtctgaa
tctactatttcaatagaaaaaccgacggttcaacacaatcgtgaaaaactgattcgtggc
ataaaattcgatgcggttttagatccttggcaagtgaaagaggaagaacagctttcgctt
attcgggatctgtttgaaggactcacggcttatgatgcgcaagggaatattgttccggcg
gcggcagaaagttggcaaacccaagataatcaaaattggacgtttattctgcgtgagggg
ctgaaatggtcaaatggtatgcctttaactgcacaagattttgttctgtcttggcaagca
ctctctcaatccgaaagtccgtttaaattttatttacagtatttaaatttgaaaggggcg
aaaccggttctggaaaaaaaacagccgttaacaaatttgggaatctcggctgaaaacgac
cgcactttagtaatcacattggataaacctaccccttatttacctgagatgttggcacac
attgcgttattgccgcaatatcgtgatttggatttattcgtatcaaacggggcatatacg
ctttcactgcgcgatgaaaaaggggttcatttggtgaaaaatccgtattattggcaaaag
gataggacatcattcaaacaggtggattatgtgccttataatagcaaaccgcttgatgag
ttagatattatctggtctccgccaaagaaaacaggaaacatacaatattttccccaatta
tgcggctatttttacgaatttaatttacgggatcctaagttggctaatcctttggtgcgg
aaagccatcgcttctcttatttctgtgtctgcgattataaataacgaaatgccggattct
attccaagttcttattttttaccaaaagcgatgttacaaggacaggattctcgttgggag
ccagtgctggcggagcagttgttggtacaaagtcatattacggaaaagaaaccgttgatt
ttacgattaacccatgacgatactttattacatcaaaatattgcaaatcgcttagcgaga
caattatcggagtcggatttattgcgtgtagaagacgagccgatgagttggcagcaattg
caggaaaaacggaataaaggtgattttcaattaattcgttccggatggtgtggcgatttt
aatcatcctatggcatttttgggattgttttactcaaaaagcccggacaacaagagtggt
tataccaatgcaggatatgatcagctttttgaacaggcactaaaaagcacatcggaaaaa
gagcggtcggaaatttatttaaaattaagtgaaatcatccaacaggaaaatttagtattg
cctctgtttcaatatacaacggctgtttatatttccccgtcggtaatgggagttcaaaaa
aattctattggtgcgatttacagcaagcatctatggcgaaaagtagaagttgagtaa
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