Rhodoferax sediminis CHu59-6-5: EUB48_00395
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Entry
EUB48_00395 CDS
T06165
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhf03032
]
EUB48_00395
Enzymes [BR:
rhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EUB48_00395
DNA replication proteins [BR:
rhf03032
]
Prokaryotic type
DNA Topoisomerases
EUB48_00395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
QDL35916
UniProt:
A0A515D676
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All DBs
Position
complement(74463..77507)
Genome browser
AA seq
1014 aa
AA seq
DB search
MKSEAFNKTLVIAEKPSVAQDIVRALTPTAGKFDKHDEYFESDSYIVSSAVGHLLEIQAP
EEFDVKRGKWSFAHLPVIPPHFDLKPVEKTKTRLNAVVRLAKRKDVTELINACDAGREGE
LIFRLIEQYAGGAKPLGKPVRRLWLQSMTPQAIRDGFAQLRSEKQMQGLADAARSRSEAD
WLVGINGTRAMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEQIRKFISRDYWEVHASFL
AEAGEYPAKWFNPAHKRDAIDAEKKADRVWSQREAQAIADAVRGKAASVTEESKPTTQAS
PPLFDLTSLQREANGKFGFSAKTTLSIAQSLYERHKALTYPRTDSRALPEDYVPVVKQTF
EMLADSGMKHLAPHAATALKGNYVKPSKRIFDNTKVSDHFAIIPTLLAPHGLSEAEQKLY
DLVVRRFMAVFFPSAEYLVTTRVTTVAPTLVATRTALPPEGAAPGLGRPGVAAAAGHNFK
TEGKVLVKPGWLAIYGKEAAEEVADAKDGDKGQSLVPVKPGEMVRAETVEPKGLKTRPPA
RYSEATLLGAMEGAGKLVDDDELREAMQEKGLGTPATRAAIIEGLINEKYMLREGREMIP
TAKAFQLMTLLRGLGVEELSKAELTGEWEYKLAQMEHGKLSRESFMAEIAAMTERMVKKA
KEYDRDTIPGDYATLQAPCPNCGGVVKENYRRYTCTGKSGTGTDACGFSFGKTPAGRTFE
VAEVEQFLRDKKIGPLEGFRSKAGWPFTAEMVLKFDEETKNFKLEFDFGDDKNAETGELV
DFSGQTSLGPCPKCGSAVFEHGKSYVCEKSVPTAAQATPTCDFKSGQIILQQPVVREQMS
KLLESGKTDLLDKFVSMRTRRAFKAYLAWDKEAGKVNFEFAPSKFPPRKTAAKTAAPEAA
AAKAAPAKTARKVAAKAPAKKVASKTAAVKTPRKSAGKPGAGLTPSAALAAVIGAEPVAR
TQVIKKLWDYIKANGLQDAQNKRAINADARLQPVFGKDQVTMFELAGIVGKHLS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgaagctttcaataaaacattggtcattgcagaaaagccgtcggtcgcgcag
gacatcgtgcgcgcgctcacgcccacggccggcaagttcgacaagcacgacgagtatttc
gagagcgacagctacatcgtctccagcgccgtcggccatctgctggagatccaggcgccc
gaggaattcgacgtcaagcgcggcaagtggagctttgcccacctgccggtgatcccgccg
cacttcgacctcaagccggtggagaaaaccaaaacccgcctgaatgccgtggtccggctc
gccaaacgcaaggacgtgaccgaactgatcaacgcctgcgacgcgggccgcgagggcgag
ctgatcttccggctgatcgagcagtacgccggtggcgccaagccgctgggcaagccggtg
cgccgcctgtggctgcagtcgatgacgccgcaggcgatccgcgacggcttcgcgcagctg
cgcagcgaaaaacagatgcaggggctggccgacgcggcgcgctcgcgctccgaggccgac
tggctggtcggcatcaacggcacgcgcgccatgaccgccttcaactcgcgcgacggcggc
ttcttcctgaccacggtcgggcgcgtgcagacgcccacgctgtcggtggtggtggagcgc
gaagagcagatccgcaagttcatcagccgcgactactgggaagtgcacgccagctttctg
gccgaggccggcgagtacccggccaaatggttcaaccccgcgcacaagcgcgatgccatt
gatgccgagaaaaaggcggaccgcgtctggtcgcagcgcgaggcccaggccattgccgat
gccgtgcgcggcaaggccgccagcgtcaccgaggagagcaagcccacgacgcaggcctcg
ccgccgctgttcgacctgacctcgctgcagcgtgaggccaacggcaagttcggcttttcg
gccaagaccacgctgtcgatcgcgcaaagcctgtacgagcggcacaaggcgctgacctac
ccgcggaccgactcgcgcgcgctgcccgaggactatgtgccggtggtcaagcagaccttc
gagatgctggccgacagcggcatgaaacacctggcgccccatgcggccacggcgctcaag
ggcaactacgtcaagcccagcaagcgcatcttcgataacaccaaggtgagcgatcacttc
gccatcatccccacgctgctggcgccgcacggcttgagcgaggccgagcagaagctgtac
gacctggtggtgcgccgcttcatggcggtgtttttcccgagtgccgaatacctggtgacg
acgcgtgtcacaaccgttgcccccacgcttgtcgctacgcgtactgcgctgccccccgag
ggggccgcacctggcttggggcggcccggcgttgcggcggccgccggccacaacttcaag
accgagggcaaggtgctggtcaagccgggctggctcgccatctatggcaaggaagcggcc
gaagaggtcgctgacgccaaggacggcgacaagggccagagcctggtgccggtcaagccg
ggcgagatggtgcgcgccgagacggtggagcccaagggcctgaaaacccgcccgccggcg
cgctactccgaggccacgctgctgggcgcgatggaaggcgccggcaagctggtggacgac
gacgagctgcgcgaggccatgcaggaaaagggcctgggcacgccggccacgcgcgcggcc
atcatcgaaggcctgatcaacgagaaatacatgctgcgcgagggccgcgagatgatcccg
acggccaaggcgttccagctcatgacgctgttgcgcgggctgggcgtggaagagctgtcc
aaggccgagctgacgggcgaatgggaatacaagctggcgcagatggagcacggcaagctg
agccgcgaatccttcatggccgagatcgccgccatgaccgagcgcatggtcaaaaaggcc
aaggaatacgaccgcgacaccattccgggcgactacgcgaccttgcaggcaccctgcccc
aactgcggcggcgtggtgaaggaaaactaccgccgctacacctgcaccggcaaaagcggc
acgggcacagacgcctgcggcttctcgttcggcaagacgccggccgggcggaccttcgag
gtggccgaggtcgagcagtttctgcgcgacaagaaaatcggcccgctggagggtttccgc
tccaaggcgggctggccgttcacggccgagatggtgctcaagttcgacgaagaaaccaag
aacttcaagctggagttcgacttcggcgacgacaagaacgccgagaccggcgagctggtc
gatttctcgggccagacctcgctcggcccgtgccccaagtgcggcagcgccgtgttcgag
catggcaagagctatgtctgtgaaaagtcagtgcccactgctgcgcaagcgacgcccacc
tgcgacttcaagagcggccagatcatcttgcagcagcccgtggtgcgcgagcagatgagc
aagctgctggaaagcggcaagaccgacctgctcgacaagtttgtctccatgcgcacgcgc
cgcgccttcaaggcgtacctcgcgtgggacaaggaggccggcaaggtcaacttcgagttc
gccccgtccaagttccccccgcgcaagacggccgccaaaacggccgcgcccgaggcggca
gccgccaaggccgcgccggccaagacggcgcgcaaggtggcggccaaggcccccgccaag
aaagtcgccagcaaaaccgctgcggtcaaaacgccgcgcaagtcggccggcaagcccggc
gccggcctgaccccgagcgcggcgctggccgccgtcatcggcgcggagccggtggcgcgc
acccaggtgatcaagaagctgtgggactacatcaaggccaatggtctgcaggacgcgcag
aacaagcgggccatcaatgccgacgccaggcttcagcccgtgttcggcaaggaccaggtg
accatgttcgagctggccggcatcgtgggcaagcatttgagctga
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