Rhodoferax sediminis CHu59-6-5: EUB48_00455
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Entry
EUB48_00455 CDS
T06165
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00020
Citrate cycle (TCA cycle)
rhf00640
Propanoate metabolism
rhf00660
C5-Branched dibasic acid metabolism
rhf00720
Other carbon fixation pathways
rhf01100
Metabolic pathways
rhf01110
Biosynthesis of secondary metabolites
rhf01120
Microbial metabolism in diverse environments
rhf01200
Carbon metabolism
Module
rhf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EUB48_00455 (sucD)
00640 Propanoate metabolism
EUB48_00455 (sucD)
00660 C5-Branched dibasic acid metabolism
EUB48_00455 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
EUB48_00455 (sucD)
Enzymes [BR:
rhf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EUB48_00455 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QDL35928
UniProt:
A0A515D6C0
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All DBs
Position
86838..87731
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AA seq
297 aa
AA seq
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MSILINKDTKVITQGITGKTGQFHTGKCQEYANGKNCFVAGVNPKKAGESIFNIPIYGSV
KEAADKTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLLVRNKMRAKVA
AGGKETLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTEIGLG
QSSAVGIGGDPINGLKHIDIMRLFNDDPDTDAVIMIGEIGGPDEAEAARWCKAHMKKPIV
GFIAGVTAPAGKRMGHAGALISGGADTAEAKLAVMEECGFKVTRNPSEMAKLLKALL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctcatcaacaaagacaccaaagtcatcacccagggcatcaccggcaagacc
ggccagttccacaccggcaagtgccaggaatatgccaacggcaagaactgcttcgtcgcg
ggcgtgaacccgaagaaggcgggcgagtcgatcttcaacatcccgatctacggttcggtc
aaggaagccgcggacaagacgggcgcgacggtgtcggtgatttacgtgccgccggcgggc
gcggccgccgcgatctgggaggccgtcgaggccgatctggatctggcgatctgcatcacc
gagggcatcccggtgcgcgacatgctgctggtgcgcaacaagatgcgcgccaaggtggcc
gctggcggcaaggaaaccctgctgctcggccccaactgcccgggcctgatcacgccggac
gaaatcaagatcggcatcatgcccggccacatccaccgcaagggccgcatcggtgtggtc
tcgcgctccggcacgctgacctatgaggcggtggcgcagctgaccgaaatcggcctgggc
cagtccagcgcggtgggcattggcggcgacccgatcaatggcctcaagcacatcgacatc
atgcgtctcttcaatgacgacccggacaccgacgccgtcatcatgatcggcgaaatcggc
ggcccggacgaagccgaagccgcgcgctggtgcaaggcccacatgaaaaaacccatcgtc
ggcttcatcgccggcgtcaccgctcccgcgggcaagcgcatgggccatgccggtgcgctg
atctcgggtggcgccgacacggccgaggccaaactcgcggtcatggaggagtgcggcttc
aaggtcacgcgcaatccgtccgagatggccaagctgctcaaggcgctgctgtaa
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