Rhodoferax sediminis CHu59-6-5: EUB48_01520
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Entry
EUB48_01520 CDS
T06165
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhf03009
]
EUB48_01520 (rsmB)
Enzymes [BR:
rhf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
EUB48_01520 (rsmB)
Ribosome biogenesis [BR:
rhf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EUB48_01520 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_25
NusB
FtsJ
Methyltransf_31
Methyltransf_12
Cons_hypoth95
Methyltransf_11
Methyltransf_37
Methyltr_RsmF_N
TrkA_N
Methyltransf_5
Motif
Other DBs
NCBI-ProteinID:
QDL36120
UniProt:
A0A515D6T3
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All DBs
Position
308318..309664
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AA seq
448 aa
AA seq
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MNAPASPGAPPLWRQLNAVATVLVAICAGESGTAALNHVEAGLRPGVQALVFHVLRWLGR
AQALRQQLAKRAPPAQADALLCAALALAWREEGAPYDAFTLVDQAVEAAKRHPDTRRQAS
FINACLRRFLRERGPLVAATDDDPVAVWNHPRWWIARLQKEHPAHWQEILRANNTHAPMT
LRVNQKKVAVAQYLCTLRAANIIATQAGESGVVLHKAMPVGAIPGFMEGQVSVQDAAAQM
AAPLLLAGWAGRRDLHILDACAAPGGKTAHLLERADDARVTALDIDPARCERIDQNLQRL
GLHASVVAADAMKPETWWPQQCHSEPFDAILLDAPCTASGIVRRHPDVRWLRRESDIAQL
AAIQAVLLASLWPLLKPGGRLLYCTCSVFKAEGYDQIQTFVTHNTDATLLPSPGHLMPQI
GANGDGVPDNQAGDHDGFFYALLEKRAA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcctgcgtcccccggcgcgccgcccctgtggcgccagctgaatgcggttgct
acggttttggtagctatttgtgcaggtgagtcggggactgcagccctgaatcatgtagaa
gccgggctgcggcccggggtccaggcgctggtctttcatgtgctgcgctggctcggccgg
gcgcaggcgctgcggcagcagctggccaagcgcgcgccgccggcgcaggccgatgcgctc
ctgtgcgccgcgctggcgctggcctggcgcgaggagggcgcgccgtatgacgccttcacg
ctggtcgatcaggcggtggaggccgccaagcgccaccctgacacgcgccggcaggccagc
ttcatcaacgcctgcctgcgccgcttcctgcgcgagcgcgggcccctggtggcggcgacc
gacgatgacccggtggccgtctggaatcacccgcgctggtggatcgcgcgactccagaag
gagcatcccgcgcactggcaggagatcctgcgggccaacaacacgcacgcccccatgacg
ctgcgggtaaatcagaaaaaagtggctgtagcccaatacctgtgtacactgcgcgctgca
aatatcatagcgactcaggctggagagagcggcgtggtgctgcacaaggcgatgccggtc
ggcgccattccgggctttatggagggccaggtgtcggtgcaggacgcggccgcccaaatg
gccgcgcccctgctgctggctggctgggcgggccggcgggatttgcacatcctggacgcc
tgcgccgcccctggcggcaagaccgcgcatttgctggaacgggccgacgacgcccgtgtc
acggcgctggacatcgacccggcacgctgcgagcgcatcgaccagaacctgcagcgcctg
gggctgcacgccagcgtggtcgccgccgacgccatgaaacccgagacctggtggccgcag
cagtgccacagtgagccgttcgacgccatcctgctggacgcgccctgtaccgcctcgggc
atcgtgcgccggcacccggacgtgcgctggctgcgccgcgagagcgacatcgcccagctg
gccgcgatccaggcggtactgctcgcaagcctgtggccgctactcaagccgggcgggcgc
ctgctgtactgcacctgctcggttttcaaggccgaaggatacgatcagatacaaacgttt
gttacacacaacaccgatgccacgttactgccgtcgccgggccatttaatgcctcaaatc
ggggcaaacggcgacggcgtcccggacaatcaggcaggtgatcacgacggttttttttac
gcgctgctggaaaaacgtgcggcttga
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