Rhodoferax sediminis CHu59-6-5: EUB48_01780
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Entry
EUB48_01780 CDS
T06165
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhf03000
]
EUB48_01780
Transcription factors [BR:
rhf03000
]
Prokaryotic type
Helix-turn-helix
Other families
EUB48_01780
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
HTH_23
HTH_AraC
HTH_7
AAA
HTH_30
HTH_50
HTH_Tnp_ISL3
HTH_28
Mg_chelatase
AAA_2
HTH_11
HTH_AsnC-type
AAA_16
AAA_22
HTH_22
HTH_29
HTH_20
Zeta_toxin
UPF0489
HTH_24
Autoind_synth
Motif
Other DBs
NCBI-ProteinID:
QDL36165
UniProt:
A0A515D6X1
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Position
366011..367963
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AA seq
650 aa
AA seq
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MHLQQREHIATVMQVAGDGLASGHATTHDEIIRASWQRCVHEHRLDPTRMQEAVILPSER
LREHQDQMEEFLHIARHGLETLYQQVAGMGYCVLLTDARGVTVDFLGDLVFEPSLRKAGL
YLGADWSEHHAGTCGVGTCIATGEALTVHLDDHFDATHIPLTCTTAPVYDALGQLNAVLD
ISALTSPSAKQSQHLALQLVKVYANHVENASFLHRFRHDWILRLSGAPQFLDMNPEYLLA
VDSAGRVIGHNRRAQLLLEADTNGPPVLGQPFERLFNASFNDLGRFVRVRPSDQRAITLA
GSARLLFMLVAPPPVRGAAPAQALERKLPAPLAGLSGGDPALDRQIERAARLVNSPVSML
LTGETGTGKEYFAKALHESSERRRQPFVAVNCAAIPETLIESELFGHLPGSFSGAGPKGK
RGLIQEADGGTLFLDEIGDMPRALQGRLLRVLAEREVLPIGATRPMPVNIRVIAATHCDL
EALVREGCFRDDLYYRLNGAHIMLPPLRERRDLGWMLDRMLGQDVSGAALKDAPELAPAA
RAWLLAHRWPGNLRELRNVIEYARTVCSQGYIELGDLPDTPGTAAAPQALAPRTAAATSE
ATQLLQQLRAARWNVTAVARQLGISRMTLYRRMKRWGISSPNQRDDQALP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcagcaacgcgagcatattgcgacggtcatgcaggtggccggcgacgggctc
gcatcgggtcacgcgacgacgcacgacgagatcattcgcgcctcttggcagcgctgcgtg
cacgaacaccggctggaccccacgcgcatgcaggaagccgtcatcctgcccagcgagcgc
ctgcgcgagcaccaggaccagatggaagagttcctgcatattgcgcgccatggcctggag
acgctgtaccagcaggtggccggcatgggctactgcgtgctgcttaccgatgcgcgcggc
gtcacagtggattttctcggtgatctggtgttcgagccgagcctgcgcaaggccggcctg
tacctgggcgcggactggagcgaacaccatgccggcacctgcggcgtgggcacctgcatc
gccaccggcgaggcgctgaccgtgcacctcgacgaccactttgacgcgacccacatcccg
ctgacctgcaccaccgctccggtgtacgacgcgctcggccagctcaatgcggtgctcgat
atctccgcgctcacgtcgcccagcgccaagcagagccagcacctcgcgctgcaactggtc
aaggtgtatgccaaccacgtcgagaatgcgagcttcctgcaccgctttcgtcatgactgg
atcctgcgcctgagcggcgcgccccagtttctcgacatgaatcccgagtacctgctggcc
gtggacagcgcgggccgagtgatcggccacaaccggcgtgcccagttgttgctcgaggcg
gacacgaacggcccgccggtgctgggccagccgttcgagcggctgttcaatgcctccttc
aatgacctcgggcgcttcgtgcgcgtgcgtccgagcgaccagcgggccatcaccctggcc
ggcagtgcgcggctgctgttcatgctggtcgcaccgccgccggtgcgcggggccgcgccg
gcccaggccctggagcgcaagctgccggctccgctggcgggcctgtcgggcggcgacccg
gcgctggaccggcaaatcgaacgggcggcccggctcgtcaattcacccgtcagcatgctg
ctgacgggcgagaccggcaccggcaaggagtatttcgcgaaggcgctgcacgagagcagc
gagcgccgacgccagccgttcgtggcggtgaactgcgcggccattcccgaaaccctgatc
gagagcgaactgttcggccacctgcccggcagcttctcgggtgccggccccaagggcaag
cgtggcctgattcaggaggccgatggcggcacgctgttcctcgacgagatcggcgacatg
ccgcgcgccctgcagggccgcctgctgcgcgtgctggccgagcgcgaggtgctgccgatt
ggcgcgacgcggccgatgccggtgaacatccgtgtgattgccgcgacccactgcgacctg
gaagcgctggtgcgcgagggctgttttcgcgacgacctgtactaccgcctcaacggtgcc
cacatcatgctgccgccgctgcgcgagcggcgcgacctgggctggatgctggaccgcatg
ctgggtcaggatgtgtcgggcgccgcgctcaaggacgcgccggagctcgcgcccgctgcg
cgtgcctggctgctggcacaccgctggccgggcaatctgcgcgagctgcgcaacgtgatc
gagtacgcccgcacggtctgcagccagggctacatcgaactgggcgacctgcccgatacg
ccgggtacggcggcggctccgcaggcactggcgccgcgcacagcggccgccaccagcgag
gcgacgcaactgctgcagcaattgcgtgccgcgcgctggaacgtgactgcggtggcgcgc
caactgggcatctcccgcatgacgctgtaccggcgcatgaagcgctggggtatcagctcg
cccaaccagcgggacgatcaggcgttgccttga
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