Rhodoferax sediminis CHu59-6-5: EUB48_01890
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Entry
EUB48_01890 CDS
T06165
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf02020
Two-component system
rhf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_01890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EUB48_01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhf03000
]
EUB48_01890
Transcription factors [BR:
rhf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
EUB48_01890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_24
MarR
MarR_2
HTH_46
TrmB
Sigma70_r4
DUF7343
Rrf2
HTH_IclR
TetR_C_13
HTH_6
Motif
Other DBs
NCBI-ProteinID:
QDL36182
UniProt:
A0A515D6Z9
LinkDB
All DBs
Position
393024..393686
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AA seq
220 aa
AA seq
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MTAAPRADPVDETLLAALCTANRLLAQRGVVRRYPKNKVLITEGGAGDTLFVLLAGSVKV
YSMDGYGREITFGTINAGDYFGEMSLDGGPRSASVMTLEPCTCSVLSSDDVRAHLAQHPN
FALGLIEQIIRRARDATAIARNMALLSVHGRVVALLEGLHGPATGAAGVTLHPITHQDIA
NRVGSSREMVSRLLKEMEKGGYIELGVKRITLLKELPPRW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgccccccgggccgacccggtcgacgaaacccttcttgccgccctgtgcact
gccaaccgcctgctggcccagcgtggcgtggtgcgccgctaccccaaaaacaaggtactg
atcaccgaaggcggcgccggcgacacgctgttcgtgctgctcgcgggcagcgtcaaggtc
tattcgatggatggatacggccgcgaaatcacctttggcaccatcaacgccggcgactac
tttggcgaaatgtcgctcgacggcgggccccgttcggcctccgtcatgacgctggagccc
tgcacctgctcggtgctaagcagcgacgacgtgcgcgcccatctggcgcagcaccccaat
ttcgctctcggtctgatcgagcagatcatccggcgcgcccgcgacgccaccgccatcgcg
cgcaacatggccctgctcagcgtgcatgggcgcgtcgtggccctgctcgaaggtctgcac
ggccccgccaccggcgccgcaggcgtgacgctgcaccccatcacgcaccaggacatcgcc
aaccgcgtcggctcctcgcgcgagatggtcagccgcctgctcaaggagatggaaaagggc
ggctacatcgagctcggcgtcaagcgcatcacgctgctcaaggagctgcccccgcgctgg
taa
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