Rhodoferax sediminis CHu59-6-5: EUB48_02010
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Entry
EUB48_02010 CDS
T06165
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00730
Thiamine metabolism
rhf01100
Metabolic pathways
rhf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EUB48_02010 (thiC)
Enzymes [BR:
rhf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EUB48_02010 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDL36205
UniProt:
A0A515D708
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Position
418696..420567
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AA seq
623 aa
AA seq
DB search
MNAPDKLAQFINLTREPLPASRKRYVTGALGIKVPLREILQSNGEAVTVYDTSGPYTDPD
AVIDVRQGLPTPRQRWIDDRGDTEAYVGRVPFALDDGAKHGETDTLAALRAQAAGLQRAP
RRARIGANVSQMHYARQGIVTAEMEYVAIRENQKLEWMQQYQQDAAREKRLAGNSFGAAI
PKVMTPEFVRDEVARGRAIIPANINHTELEPMAIGRNFLVKINANIGNSAVTSSIEEEVE
KLVWAIRWGADTVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGVAEDLTWEI
FRDTLIEQAEQGVDYFTVHAGVRLPFIHLTANRVTGIVSRGGSILAKWCIAHHKENFIYT
HFEEMCEIMKAYDVSYSLGDGLRPGSGADANDEAQFAELRTLGELTQVAWRHDVQVMIEG
PGHVPMHMIQENMTEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLC
YVTPKEHLGLPDREDVKTGIITYKIAAHAADVAKGHPGARARDDALSRARFEFRWMDQFN
LSLDPDTARNFHDETLPKDSSKVAHFCSMCGPKFCSMKITQEVREYAKTLGVTDEQALSE
GMQSMSEEFKRKGAEIYIPISKA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcccgacaaattagcccaattcatcaacctgacccgggagccgctgcccgcg
tcgcgcaagcgctacgtcacgggcgcgctgggcatcaaggtgccgctgcgcgaaatcctg
cagagcaacggcgaagccgtcacggtgtacgacacctcggggccctataccgaccccgat
gccgtgatcgacgtgcgccagggcctgccgacgccacgccagcgctggatcgacgaccgg
ggcgatacggaggcctacgtgggccgcgtcccgttcgcgctcgacgacggcgccaaacat
ggcgaaaccgacacgctggccgctttgcgtgcccaggccgcgggcctgcagcgcgcgccg
cggcgcgcccggattggcgccaacgtgtcgcagatgcactatgcgcgccaaggcatcgtc
acggcggagatggaatacgtggcgatccgcgagaaccagaagttggagtggatgcagcag
taccagcaggacgccgcgcgcgaaaagcggctggccggcaacagcttcggcgcggcgatc
ccgaaggtgatgacgccggaattcgtgcgcgatgaggtggcacgtggacgcgccatcatt
ccggccaacatcaaccacaccgagctggagccgatggccatcggacgcaacttcctggtg
aagatcaacgccaacatcggcaactcggccgtcacctcgagcatcgaggaagaggtggag
aagctggtctgggcgatccgctggggcgccgacacggtgatggacctgtcgaccggcaag
aacatccacaccacgcgcgactggatcgtgcgcaactccccggtgccgatcggcacggtg
ccgatctaccaggcgttagagaaagtcggcggcgtggccgaggatttgacgtgggagatt
ttccgcgacaccttgatcgagcaggccgagcagggcgtggactacttcacggtacatgcg
ggcgtgcgcctgccgttcatccacctcacggcgaatcgcgtcaccggcatcgtctcgcgc
ggcggatcgatcctggcgaagtggtgcattgcgcaccacaaggaaaatttcatctacacg
cacttcgaggaaatgtgcgagatcatgaaggcttacgatgtgagctattcgctcggcgac
ggcctgcgcccgggctcgggcgcggacgccaacgacgaggcgcagtttgccgagctgcgc
accctgggcgagctcacgcaggtggcctggcgccacgacgtgcaggtcatgatcgagggg
cccggccatgtacccatgcacatgatccaggagaacatgaccgagcagctcaaacactgc
cacgaggcgccgttctacacgctgggcccgctgaccaccgacatcgcccccggctacgac
cacatcaccagcggcatcggcgccgccatgatcggctggtacggcacggcgatgctgtgc
tacgttacgcccaaggaacacttgggcctgccggaccgcgaagacgtcaagaccggcatc
atcacctacaagatcgcggcgcacgcggcggacgtggccaagggccaccctggggcgcgc
gcgcgcgacgatgcgctgtcgcgcgcgcgcttcgagtttcgctggatggaccagttcaac
ctgtcgctggaccccgacacggcgcgcaatttccatgacgagaccttgccgaaggattcg
tccaaggtggcgcacttctgctccatgtgcggaccgaagttctgctccatgaagatcacc
caggaagtgcgcgaatacgccaaaaccctgggtgtgacggacgagcaggccctgagcgag
ggcatgcagagcatgtcggaggagttcaagcgcaagggcgcggagatttacattccgatc
agcaaggcgtga
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