KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_02215
Entry
EUB48_02215       CDS       T06165                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf03030  DNA replication
rhf03430  Mismatch repair
rhf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EUB48_02215
   03430 Mismatch repair
    EUB48_02215
   03440 Homologous recombination
    EUB48_02215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhf03032]
    EUB48_02215
   03400 DNA repair and recombination proteins [BR:rhf03400]
    EUB48_02215
Enzymes [BR:rhf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EUB48_02215
DNA replication proteins [BR:rhf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EUB48_02215
DNA repair and recombination proteins [BR:rhf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EUB48_02215
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C DUF5795
Other DBs
NCBI-ProteinID: QDL39589
UniProt: A0A515DGR9
LinkDB
Position
460207..460860
AA seq 217 aa
MARFSPGAVVAALRREWRLKHLRDPAYRFMFDAAPPDEWVALDCETTGLNVRSDKIISIG
AVRIVGNRIMTSERLALLVRPDKGISADSVRIHRLRERDVAQGLPIAEAMAQLMRFIGSR
PLVGYYLEFDVAMLNRAIRPLLGVGLPQPRIEVSALYYDYKFKQLPPYQQQLGADIDLRF
ATLMDDLGLPQRAAHDAVNDAVMAALAFIKLRQLHGG
NT seq 654 nt   +upstreamnt  +downstreamnt
ctggcgcgcttttcgcccggggcggttgtcgccgcgctgcggcgcgaatggcgtctgaag
cacctgcgcgacccggcttaccggttcatgttcgatgcggcgccgcccgatgagtgggtg
gcgctggactgcgagaccaccggcctgaatgtgcgcagcgacaaaatcatctcgatcggc
gcggtacgcatcgtgggcaaccgcatcatgaccagcgagcggctggcgctgctggtgcga
ccggacaagggtatctcggccgacagcgtgcgcattcatcgcctgcgcgaacgcgacgtg
gcgcagggtctgccgatcgcagaggcgatggcgcagctgatgcgtttcatcggcagccgg
ccgctggtgggctattacctggagttcgacgtggcgatgctgaatcgcgccatcaggccc
ctgctgggcgtgggcctgccgcagcccaggatcgaagtctcggcgctgtattacgactac
aagttcaaacagctgccgccctaccagcagcagctcggcgccgatatcgacctgcgcttt
gccacgctcatggacgacctgggcctgccgcagcgtgccgcccacgatgcggtgaacgat
gccgtgatggcggcgctggcgttcatcaagctgaggcagctgcatggcgggtga

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