Rhodoferax sediminis CHu59-6-5: EUB48_02525
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Entry
EUB48_02525 CDS
T06165
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
EUB48_02525
Enzymes [BR:
rhf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EUB48_02525
Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EUB48_02525
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
MdcG
Motif
Other DBs
NCBI-ProteinID:
QDL36297
UniProt:
A0A515D7G6
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All DBs
Position
complement(533375..535393)
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AA seq
672 aa
AA seq
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MKINKILTPSLSATLIAGVLFAALPSAQAQPGSDEALLQMSQAFKRGDKAALTALLPLAR
GNPLEAWAAYWELKARLDDASAQEVQDFLTRYAGTYQEDRLRNDWLLLLGQRRDWEGFAA
EYPKFRMRDDREVQCYALHIEQLTSATPSPTLAEQVRKNWFALHKADDGCTLAAGTLIFA
QEMPALEAWRKARLAMAANRLTVARNAVGIVAPEALNLVADLGNSPAKFLAGKAVAMSRV
SKQLVVLALIRMAANDPDAAATQLDSKWSPQLTSEERNWVWGVIGKQAATRLSGDALNYY
GRVSRDSDLPDDLLEWKARAALRAGTWPTVLTAIKAMSEDARKNPTWVYWKARALLATLN
GAQRADPASPRRLEANALLEGIAGPSGFYEQLALEDLGQRVTVPPRPAPPTAQEKQAALA
DPGLNRALYAIGLGLRSEGVREWNYATNLHTPGGMSDRELLAAADLACQRKIWDRCINTS
ERTKSFMDFDQRFPMPHEQAVIKRTREIGLDPAYVYGLIRQESRFIIDAQSGVGASGLMQ
VMPATARWTARKIGLVNFNAEQISDRDTNIAIGTGYLKLILDDFDGSMALAAAAYNAGPG
RPRSWRNGPVLDAAIWAENVPFAETRDYVKKVLANTTDYAAILSGQPQSLKARLGTVGPR
DASLPDPGKDLP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaacaagattttgacaccgtctctctccgccaccctgattgccggcgtcctg
ttcgcggcgctaccgtctgcacaggcccaacccggcagcgacgaggccctgctgcaaatg
agccaggccttcaaaaggggcgacaaggccgcactcacggcgctgctgccgctggcccgg
ggcaacccgctcgaagcctgggccgcctattgggagctgaaggcgcggctggatgacgcc
agcgcgcaggaagtgcaggatttcctcacgcgctacgccggcacctaccaggaagaccgg
ctgcgcaacgactggctgctgctgttgggccagcgccgcgactgggagggtttcgccgcc
gaataccccaaattccgcatgcgcgacgaccgcgaagtgcaatgctacgcgctgcacatc
gagcagctgaccagcgccacgccctcgcccaccctggccgagcaggtccgcaaaaactgg
tttgcactgcacaaggccgatgacggctgcacgctggcggcaggcaccctgatcttcgcc
caagaaatgcccgcgctggaggcgtggcgcaaggcgcgactggcgatggccgcgaatcgc
ctgacggtggcgcgcaacgcggtcgggatcgtcgcccccgaggctttgaacctggtcgcc
gacctcggcaacagcccggcgaaatttctcgccggcaaagccgtcgcgatgtcgcgcgtg
agcaagcagctggtggtgctggccctgatccggatggccgccaatgacccggacgccgcc
gcgacccagctcgatagcaaatggagcccgcagctcaccagcgaagagcgcaactgggtc
tggggcgtcatcggcaagcaggcggcgacccgcttgagcggcgatgcgctgaactactac
gggcgcgtcagccgggacagcgacctgcccgacgacctgctggaatggaaagcccgcgcc
gcgctgcgcgccggcacatggcccaccgtgctgacggcgatcaaggccatgagcgaggac
gcgcgcaagaatcccacctgggtttactggaaggcacgcgcgctgctggccaccctgaac
ggtgcccagcgcgccgaccccgcgtcgccgcggcgccttgaagccaacgcgctgctggag
ggcatcgcgggtcccagcggtttctacgagcaactggcgctggaagatctgggccagcgc
gtcaccgtgccgcccaggcccgcgccgccgacggcacaggaaaagcaggcggcgctggcg
gacccgggcctgaaccgggccttgtacgcgatcggactcgggctgcgcagcgaaggcgtg
cgcgaatggaactacgccaccaacctgcacacgcccggcggcatgagcgaccgcgaactg
ctggccgccgccgacctggcctgccagcgcaaaatctgggaccgctgtatcaacaccagc
gagcgcaccaaatcgttcatggacttcgaccagcgctttcccatgccgcacgagcaggcc
gtgatcaagcgcacgcgcgagatcggcctcgacccggcctatgtgtacggcctgatccgc
caggaaagccgcttcatcatcgacgcacagtcgggtgtgggtgcctcgggcctgatgcag
gtcatgcccgccacggcgcgctggacggcccgcaagatcgggctggtcaacttcaacgcc
gagcagatttccgatcgcgacaccaacatcgcgatcggcaccggctacctcaagctgatc
ctggacgacttcgacggctccatggcgctggccgccgccgcctacaacgccggcccgggg
cggccgcgcagctggcgcaacggcccggtgctggacgcggccatctgggccgaaaacgtg
ccgtttgccgaaacccgcgactacgtcaagaaagtgctggccaacaccaccgattacgcg
gccatcctgagcggccagccccagtcgttgaaggcccggctgggcacggtggggccgcgc
gatgccagcttgccggacccgggcaaggatttgccctga
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