Rhodoferax sediminis CHu59-6-5: EUB48_03770
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Entry
EUB48_03770 CDS
T06165
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00300
Lysine biosynthesis
rhf00470
D-Amino acid metabolism
rhf01100
Metabolic pathways
rhf01110
Biosynthesis of secondary metabolites
rhf01120
Microbial metabolism in diverse environments
rhf01230
Biosynthesis of amino acids
Module
rhf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EUB48_03770 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EUB48_03770 (lysA)
Enzymes [BR:
rhf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EUB48_03770 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDL36510
UniProt:
A0A515D7W6
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Position
complement(787134..788453)
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AA seq
439 aa
AA seq
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MTSPTTPASLPGQPHFAYRDGELFAENVRLADLARAHGTPLFVYSKAAMLAALAAYQRGF
AGRNAQICYAMKANSSLGVLQVFAQAGCGFDIVSGGELERVLAAGGDAARVIFSGVGKTR
AEMRQALDAGIGCFNVESEAELEVLNEVALATGKPARVSIRVNPNVDPKTHPYISTGLKG
NKFGVAHERALGAYQRAAALPGLQVVGIDCHIGSQITEATPYLDAMDRVLDLVEAIEAAG
IPIQHLDFGGGLGIDYNGETPPPADALWAQLLARLDARGFGQRRLMIEPGRSLVGNAGVC
LSEVLYLKPGEEKNFCIIDAAMNDLPRPAMYQAFQQIVPLSLRDPDTPQRDAGAPAPTTW
DVVGPVCESGDWIGRDRALALQPGDLLAVLSAGAYCMSMASNYNTRGRAAEVLVDGDQAS
LIRRRESAADQMRGENLLR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacccacaactccggcgtccctgccaggccagccccactttgcctatcgtgac
ggcgagctgtttgccgagaacgtgcgcctggccgatctcgcgcgcgcgcatggcacaccc
ctgttcgtctattcaaaggccgccatgctggcggcgctggcagcctatcagcgcggcttt
gcgggccgcaacgcgcaaatctgctatgccatgaaggccaactcgtcgctgggtgtgctg
caggtgtttgcgcaggccggttgcggcttcgacatcgtctcgggcggcgagctcgagcgc
gtgctggccgcgggcggcgacgccgcacgggtgattttttccggcgtgggcaaaacgcgc
gccgagatgcgccaggcgctcgacgcgggcatcggctgcttcaatgtggagagcgaggcc
gagctcgaggtgctgaacgaagtggcactggcaacgggcaagcctgcgcgcgtgagcatc
cgcgtgaacccgaacgtggaccccaagacgcacccttacatttccaccggcctcaaaggc
aacaaatttggcgtggcccatgagcgggcactcggcgcctaccagcgcgccgccgcgctg
ccgggcctgcaagtggtaggcattgactgccacatcggctcgcagatcaccgaggcaaca
ccctatctggacgccatggaccgggtgctggatctggtcgaggcgatcgaggccgcgggc
attcccattcagcaccttgactttggtggcggcctgggcatcgactacaacggagaaacc
ccgccgcccgcggacgcgctgtgggcgcagctgctggcccggctcgacgcgcgcggtttt
ggccagcgccggctcatgatcgagcccggccgctcgctggtcggcaatgccggcgtgtgt
ctctcggaggtgctgtacctcaagcccggggaagaaaagaacttctgcatcatcgatgcc
gccatgaacgacctgccgcgtcccgccatgtaccaggcctttcaacaaatcgtgcccctg
tcgctccgcgacccggacacgccgcagcgcgacgctggcgcgcctgcgccgaccacctgg
gacgtggtgggcccggtgtgcgaaagcggcgactggattggccgtgaccgggcgctggcg
ctacagccgggcgacctgctggcagtgctgtcggccggcgcctattgcatgagcatggcg
agcaactacaacacgcgcgggcgcgccgcggaggtactggtcgatggcgaccaggcctcg
ctcatccgccggcgcgagagtgccgcggaccagatgcgcggtgaaaatttgctgcgctag
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