KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_03770
Entry
EUB48_03770       CDS       T06165                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf00300  Lysine biosynthesis
rhf00470  D-Amino acid metabolism
rhf01100  Metabolic pathways
rhf01110  Biosynthesis of secondary metabolites
rhf01120  Microbial metabolism in diverse environments
rhf01230  Biosynthesis of amino acids
Module
rhf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EUB48_03770 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EUB48_03770 (lysA)
Enzymes [BR:rhf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     EUB48_03770 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QDL36510
UniProt: A0A515D7W6
LinkDB
Position
complement(787134..788453)
AA seq 439 aa
MTSPTTPASLPGQPHFAYRDGELFAENVRLADLARAHGTPLFVYSKAAMLAALAAYQRGF
AGRNAQICYAMKANSSLGVLQVFAQAGCGFDIVSGGELERVLAAGGDAARVIFSGVGKTR
AEMRQALDAGIGCFNVESEAELEVLNEVALATGKPARVSIRVNPNVDPKTHPYISTGLKG
NKFGVAHERALGAYQRAAALPGLQVVGIDCHIGSQITEATPYLDAMDRVLDLVEAIEAAG
IPIQHLDFGGGLGIDYNGETPPPADALWAQLLARLDARGFGQRRLMIEPGRSLVGNAGVC
LSEVLYLKPGEEKNFCIIDAAMNDLPRPAMYQAFQQIVPLSLRDPDTPQRDAGAPAPTTW
DVVGPVCESGDWIGRDRALALQPGDLLAVLSAGAYCMSMASNYNTRGRAAEVLVDGDQAS
LIRRRESAADQMRGENLLR
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgacttcacccacaactccggcgtccctgccaggccagccccactttgcctatcgtgac
ggcgagctgtttgccgagaacgtgcgcctggccgatctcgcgcgcgcgcatggcacaccc
ctgttcgtctattcaaaggccgccatgctggcggcgctggcagcctatcagcgcggcttt
gcgggccgcaacgcgcaaatctgctatgccatgaaggccaactcgtcgctgggtgtgctg
caggtgtttgcgcaggccggttgcggcttcgacatcgtctcgggcggcgagctcgagcgc
gtgctggccgcgggcggcgacgccgcacgggtgattttttccggcgtgggcaaaacgcgc
gccgagatgcgccaggcgctcgacgcgggcatcggctgcttcaatgtggagagcgaggcc
gagctcgaggtgctgaacgaagtggcactggcaacgggcaagcctgcgcgcgtgagcatc
cgcgtgaacccgaacgtggaccccaagacgcacccttacatttccaccggcctcaaaggc
aacaaatttggcgtggcccatgagcgggcactcggcgcctaccagcgcgccgccgcgctg
ccgggcctgcaagtggtaggcattgactgccacatcggctcgcagatcaccgaggcaaca
ccctatctggacgccatggaccgggtgctggatctggtcgaggcgatcgaggccgcgggc
attcccattcagcaccttgactttggtggcggcctgggcatcgactacaacggagaaacc
ccgccgcccgcggacgcgctgtgggcgcagctgctggcccggctcgacgcgcgcggtttt
ggccagcgccggctcatgatcgagcccggccgctcgctggtcggcaatgccggcgtgtgt
ctctcggaggtgctgtacctcaagcccggggaagaaaagaacttctgcatcatcgatgcc
gccatgaacgacctgccgcgtcccgccatgtaccaggcctttcaacaaatcgtgcccctg
tcgctccgcgacccggacacgccgcagcgcgacgctggcgcgcctgcgccgaccacctgg
gacgtggtgggcccggtgtgcgaaagcggcgactggattggccgtgaccgggcgctggcg
ctacagccgggcgacctgctggcagtgctgtcggccggcgcctattgcatgagcatggcg
agcaactacaacacgcgcgggcgcgccgcggaggtactggtcgatggcgaccaggcctcg
ctcatccgccggcgcgagagtgccgcggaccagatgcgcggtgaaaatttgctgcgctag

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