Rhodoferax sediminis CHu59-6-5: EUB48_05640
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Entry
EUB48_05640 CDS
T06165
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf02020
Two-component system
rhf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_05640
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EUB48_05640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhf03000
]
EUB48_05640
Transcription factors [BR:
rhf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
EUB48_05640
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
HVO_A0261_N
MarR
HTH_24
GntR
HTH_11
Rrf2
HTH_Cmi2_C
MarR_2
HTH_29
RepL
HTH_23
LacI
HTH_28
DUF7481
Motif
Other DBs
NCBI-ProteinID:
QDL36834
UniProt:
A0A515D8Y3
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All DBs
Position
1168502..1169176
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AA seq
224 aa
AA seq
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MSMLSNLELLRRVPLFSMLTSVQAEAVAAAIVKHRFKRGETIVEQGKKANALFIILTGRA
RVVTSDSRGREVILASMQPGDYIGEMSLIDDEPHSATVRVEVQTDVLMLGHAEFARCLPE
NSSMAYAVMRGLVQRLRHADRKIESLALMDVYGRVARALLEFAKPEPDGTLVIRDKVSRQ
DIAKMVGASREMVSRVMKDLEERGLTEIQENGSMVIRERIEPLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgttgtcgaacctggaattattgcgccgtgtgccactgttttccatgctgacc
tcggtgcaggccgaggccgtggcggcggcgattgtcaagcaccgattcaaacgcggcgag
accatcgtggagcagggcaagaaggccaacgccctgttcatcatcctgaccggacgcgcc
cgcgtcgtgacctccgacagccgcggccgcgaggtgattctggccagcatgcagccgggc
gactacatcggcgagatgagcctgatcgacgacgagccgcattccgccacggttcgcgtc
gaggtgcagaccgacgtgctgatgctcgggcacgccgagtttgcccgctgcctgccggaa
aactcctccatggcctacgcggtcatgcgcggcctggtgcagcggctgcgccacgccgac
cgcaagattgaatcgctggccctgatggatgtgtacggccgcgtggcgcgtgccctgctg
gagtttgccaagcccgaaccggatggcacgctcgtgatccgcgacaaggtctcgcgccag
gatatcgccaaaatggtgggcgcctcgcgcgagatggtcagccgggtcatgaaggatctt
gaggaacgcggcctcaccgaaatacaggagaacggctccatggtgatcagggagcggatc
gaaccgctggactga
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