Rhodoferax sediminis CHu59-6-5: EUB48_05725
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Entry
EUB48_05725 CDS
T06165
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhf03021
]
EUB48_05725 (rpoH)
Transcription machinery [BR:
rhf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EUB48_05725 (rpoH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2390
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QDL36849
UniProt:
A0A515D8W3
LinkDB
All DBs
Position
complement(1184808..1185743)
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AA seq
311 aa
AA seq
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MSTQTGASSTALAVVNPWALMPPLGNLDAYISAVNRLPMLTLEQEQEFARKLQQNNDLEA
AGKLVLSHLRLVVSVSRKYLGYGLPHGDLIQEGNIGLMKAVKRFDPDQGVRLVSYALHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKSDALDADTHRETLSESEIDVMA
RELNVKRADVTEMETRLSGGDVMLDPGASDDGDDGYGPIAYLADAHHEPTAMIEAHQRDV
LASDGIASALATLDNRSRRIVEERWLKVNDDGSGGMTLHDLAAVYGVSAERIRQIEVAAM
KKMKKALVEYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcaaactggagcctctagcaccgccctggcggtcgtaaacccgtgggcgctg
atgcccccgctgggaaatctggacgcctatatttcggcggtcaaccgcctgcccatgctc
accctggagcaggagcaggagtttgcccgcaagctccaacaaaacaatgacctggaagcc
gccggaaagctggtgctatcgcacctgcggctggtggtttcggtctcgcgcaagtacctg
ggctatggcctgccgcacggcgacctgatccaggagggcaatatcggcctgatgaaggcc
gtgaaacgcttcgaccccgaccagggcgtgcgcctggtgagctatgcgctgcactggatc
aaggccgagattcacgaatacatcctgaaaaactggcgcatggtcaaggtggccaccacc
aaggcacagcgcaagctgtttttcaatctgcgttcgatgaagcagggcttcaagtccgat
gcgctggacgccgacacgcaccgcgaaaccctgagcgagtccgaaatcgacgtgatggca
cgcgaactcaatgtcaagcgcgccgacgtgacggagatggaaacccgtctctcgggcggc
gacgtgatgctcgacccgggcgcgtccgacgatggcgacgacggctatggcccgattgcc
tatttggccgacgcgcatcacgaaccgaccgcgatgatcgaggcgcaccagcgcgacgta
ctggccagcgacggcattgccagcgcgctggccacgctcgataaccgcagccggcgcatc
gtcgaggagcgctggctcaaggtcaacgatgacggctcgggcggcatgacgctgcacgac
ctggccgcggtctatggcgtcagcgccgaacgcattcgccagatcgaggtcgcggccatg
aagaagatgaaaaaggcgctggtcgagtacgcctga
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