Rhodoferax sediminis CHu59-6-5: EUB48_06250
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Entry
EUB48_06250 CDS
T06165
Name
(GenBank) TRAP transporter large permease subunit
KO
K21393
TRAP-type transport system permease protein
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_06250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhf02000
]
EUB48_06250
Transporters [BR:
rhf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EUB48_06250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
DUF6142
Motif
Other DBs
NCBI-ProteinID:
QDL36934
UniProt:
A0A515D973
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All DBs
Position
1298445..1300304
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AA seq
619 aa
AA seq
DB search
MNTSDDILTRSTPRPLAFFDRAMVFVTEVPAAILVVLETVILFAGVVSRYIFDAPLTWTD
ELASILFLWLAMLGAVIALRRGEHMRLATFLNWMSPARRAWVETLGTCTVVLFVAMLLLP
SYDHIVDQWIVTTPALEWHDGARVAAIGVGAVLMLAIALARLLERSSAAEVVSCVVLIAA
LAGALWFLKPVLMTLGNINLLIFFVGLVGLCVALGVPIAFSFGIATIGYLVLTTTAPLTI
VVNRMDEGMSHIILLAVPLFVFLGALIEMTGLARAMVDFLASLLGHVRGGLQYVLLGAMY
LVSGISGSKAADMAAIAPALFPEMKRRGAQEGELVALLSASGAMSETIPPSLVLITIGAV
TGVSISALFTGGLLPALVGMLALGILIYFQMRHEDMSGVPRATWGQIGKLFLISLPALAL
PFVIRTVVVEGVATATEVSTVGVVYTLLAGIFIYRQFDWGRLYPILVGTASLSGAILLII
GCATAMAWALTQSGFSRSLVELMTNVPGGKTGFLLISALMFTILGSVLEGIPAIVLFGPL
LFPVARAVGVHEVHYAMVAVFAMGLGLFAPPFGVGFYAACAIGKVEPDKAFSRVWPYLGV
LFIALLIIVAIPWLSIGFL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctccgacgacatcctgacccgcagcaccccgcgacccctggcgtttttcgac
agggccatggttttcgtgacggaagtccccgcggcgatcctcgtcgtcctggaaaccgtg
atcctgttcgccggtgtggtttcgcgctacatcttcgatgcccctttgacgtggacggac
gagctggcctccatcctgttcctgtggctggcgatgctcggcgccgtgattgcgctgcgg
cgcggcgaacacatgcgcctggccacgttcctgaactggatgtcgcccgcgcgccgggcc
tgggtcgaaacgctgggcacctgtacggtcgttttgttcgtggcgatgctgttgttgccg
tcctacgatcatattgtcgaccaatggatcgtcacgacgcccgcgctggagtggcacgac
ggcgctcgtgtggccgccattggtgtcggcgccgtgctcatgctggccattgcgctggcg
cgcctgctggagcgctccagcgcggcggaggtggtgagctgcgtcgttctgatcgccgcc
ctggcgggggcgctgtggtttctgaagcctgtgctcatgaccctgggcaacatcaattta
ctgatttttttcgtgggcctggtgggcctgtgcgtcgcgttgggcgtgcccatcgccttt
tcattcggtatcgccacgataggctacctggtgctcacgaccacggcgcccctcaccatc
gtggtgaaccgcatggacgagggcatgtcgcacatcattttgctggcggtgccgctgttt
gtgttcctgggggcactgatcgagatgacgggcctggcccgggccatggtggattttctg
gcctcgctgctcggtcatgtgcgcggcggcttgcagtatgtcctgctcggcgcgatgtac
ctggtctcggggatatcgggctccaaggcggccgatatggcggccatcgcgccggcgctg
tttcccgagatgaaaaggcgcggggcgcaagaaggggaactggtggcgctgctgtcggcc
tccggcgccatgagcgagaccatcccgcccagcctggtcctgatcaccatcggcgcggtg
acgggcgtatccatctccgcgctcttcaccggcggcttgctgccggccctggtcggcatg
ctggcgctgggcatcctgatctacttccagatgcggcatgaagacatgagcggcgtcccg
cgcgccacgtggggccagatcggcaagctgtttctgatctcgctgcccgcgctggcgctg
ccgttcgtgatccgcaccgtggtggtcgagggggtggccactgccaccgaggtctccacc
gttggcgtggtctacaccctgctggccggcatcttcatttaccgccagttcgactgggga
cgcctgtacccgatcctggtggggacggcgtccctgtccggagccattttgctcatcatc
ggttgcgccaccgccatggcctgggcgctcacgcagtcgggcttttcgcgctcgctggtc
gagttgatgaccaacgtgccgggcggcaagacaggctttctgctgatttcggcattgatg
ttcacgattctgggcagcgtgctcgaaggcattccggccatcgtgctgttcggccccctg
ctgtttccggtcgcacgcgccgtgggcgtgcacgaggtccactacgccatggtggcggtc
tttgccatggggctgggcctctttgcgccaccttttggcgtgggtttctatgccgcctgc
gcgatcggcaaggtcgagcccgacaaggcgttttcgcgcgtctggccgtatctgggtgtg
ttgttcatcgcgctgttgatcattgttgccatcccgtggctatcgatcggctttttataa
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