Rhodoferax sediminis CHu59-6-5: EUB48_06830
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Entry
EUB48_06830 CDS
T06165
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhf03032
]
EUB48_06830 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhf03400
]
EUB48_06830 (gyrA)
Enzymes [BR:
rhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EUB48_06830 (gyrA)
DNA replication proteins [BR:
rhf03032
]
Prokaryotic type
DNA Topoisomerases
EUB48_06830 (gyrA)
DNA repair and recombination proteins [BR:
rhf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EUB48_06830 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QDL37029
UniProt:
A0A515D9E5
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Position
complement(1422751..1425396)
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AA seq
881 aa
AA seq
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MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDAIVRMAQDFSLRHMLVDGQGNFGSVDGDNPAAM
RYTEIRLAKIAQEMLADIDKETVDFGPNYDGSEKEPLVLPSRVPNLLINGSGGIAVGMAT
NIPPHNLNEVVDACLHLLKNPHAGIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIEVFLEHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKVELMARPWDSQLV
REMLTRTRADGGVINADDYRPDGLEKTYGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIEDLLDILAKPARVSTIIGDELGAIKQEFGQTKIGARRSLVEHSSFDL
STEDLITPTDMVVTLSHSGYIKSQPLSEYRSQKRGGRGKQATATKEDDWVDQLFIANTHD
YILCFSNRGRLYWLKVWEVPQGSRGSRGRPIVNMFPLQEGEKITVVLPLTGEKRSFPANQ
YVFMATSMGTVKKTTLDEFGNPRKAGIIAVSLDDGDFLIGAALTDGQHDVMLFSDGGKAV
RFDEDDVRSLGRNARGVRGMSLEVGQSVIAMLVAEDESQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQTERNGKVVAATLVRADDEIMLITDKGVLVRTRVGEIREMGRATQGVT
LIGLDEGSRLSGLQRIVENDVNGDSDSDNDSTSSSTTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaagaaaccctgcccatcagtcttgaagaggaaatgcggcgcagt
tacctcgattacgccatgagcgtcatcgtggggcgcgccctgcctgatgcgcgggacgga
ctgaaacccgtgcaccggcgtgtgttgtacgcgatgcacgaactcaacaacgactggaat
cgcccttacaagaaatcggcgcgtatcgttggtgacgtcatcggcaagtaccacccgcac
ggcgatcagtcggtatatgacgccatcgtgcgcatggcacaggacttttcactgcgtcac
atgctggtggacgggcaaggcaacttcggttcggtggatggcgacaaccccgccgccatg
cgctacaccgaaatccgtctggcaaagattgcccaggagatgctggccgatatcgacaag
gaaacggttgatttcggtcccaactacgacggcagcgaaaaggagccgctggtgttgccg
tcccgggttcccaacctgctgatcaacggctccggcggcattgcggtgggcatggcgacc
aacatcccgccgcacaaccttaacgaggtggtcgatgcgtgcctgcatctgctgaaaaac
ccgcacgccggtattgacgagctgatggagatcattccagcgcccgatttccctacggca
ggtattatttacggcatcaatggcgtcaaggacggttaccgcaccggccgcggcaaggtg
gtgatgcgcgccaagtgccacttcgaagacatcgacaaggggcagcgccagtcgatcatc
gtggacgagttgccataccaggtgaacaaaaagacgctgcaggagcgcatggccgaactg
gtccacgagaagaagatcgagggcatcagccatatccaggacgagtccgacaaatcgggc
atgcgcctggtcatcgaactcaagcgcggcgaagtgcccgaagtggtgctcaacaacctc
tataaacagacgcagctgcaggacacctttggcatcaacatggtggcgctggtcaacggc
cagcccaaactttgcaatctcaaggacctgatcgaagtctttctggaacatcgccgtgaa
gtggtcacccgtcgcaccgtgttcacgctgcgcaaggcgcgcgaacgcggccatgtgctc
gaaggcctggccgtggcgctggccaacatcgacgacttcatcgccatcatccgcaacgcg
ccgacaccacccgtggccaaggttgagctgatggcccggccctgggacagccagctggtg
cgcgaaatgctgacccgcacgcgggccgacggtggcgtgatcaacgccgacgactaccgt
cccgacggcctggaaaaaacctacggcatgggcagcgatggcctgtaccggctcagcgaa
acgcaggcgcaggaaattctgcaaatgcgcctgcagcgcctgaccggcctcgagcaggac
aagatcgtggccgagtacaaggaagtcatggccgaaatcgaggatttgctcgacatcctg
gccaaaccggcgcgcgtctcgaccatcattggcgacgagctgggcgccatcaagcaggaa
ttcggccagaccaaaatcggcgcgcgccgcagcctggtcgaacacagctcgttcgacctg
agcaccgaggacctgatcacccctaccgatatggtggtcacgctgtcgcatagcggctat
atcaagagccagccgctctccgagtaccggtcccagaagcgcggtgggcgtggcaagcag
gccacggcgaccaaggaagacgactgggtcgatcagcttttcattgccaacacgcacgat
tacatcctgtgcttctccaaccggggacgcctgtactggctcaaggtctgggaagtgcct
cagggttcgcgcggctcgcgcggacgccccatcgtcaacatgttcccgctgcaggaaggc
gaaaaaatcaccgtcgtattgccgctgacgggtgagaaacgaagctttccggccaatcaa
tatgtgtttatggcgacctccatggggacggtcaagaaaaccacgctcgatgaattcggc
aacccgcgcaaggccggcatcattgcggtctcgctcgacgacggagacttcctgatcggc
gcagcgctgaccgacggccagcacgatgtgatgctgttttccgatggcggcaaggccgtg
cgcttcgacgaggacgatgtccgttcgctgggccgtaacgcccgcggtgtgcgcggcatg
tcgctcgaagtgggccaaagcgtgatcgccatgctcgtggccgaggacgaaagtcagagc
gtgctgacagccaccgaaaacggctacggcaaacgcaccagcatcactgagtacacgcgc
cacgggcgcggcaccaagggcatgatcgcgatccagcaaacggagcgcaacggcaaggtc
gtggcggccacgctggtgcgggccgacgacgaaatcatgctgattaccgacaagggcgta
ctggtacgcacccgggtcggcgaaattcgcgaaatgggacgcgccacccagggggtgacg
ctgatcgggctcgatgagggctccagactcagcggcttgcagcgcatcgtggaaaacgat
gtgaacggcgacagcgactcagacaacgacagcacttcctcatccacaacggagaatcct
cagtga
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