Rhodoferax sediminis CHu59-6-5: EUB48_07180
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Entry
EUB48_07180 CDS
T06165
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00260
Glycine, serine and threonine metabolism
rhf00630
Glyoxylate and dicarboxylate metabolism
rhf00670
One carbon pool by folate
rhf00785
Lipoic acid metabolism
rhf01100
Metabolic pathways
rhf01110
Biosynthesis of secondary metabolites
rhf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EUB48_07180 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EUB48_07180 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EUB48_07180 (gcvP)
00670 One carbon pool by folate
EUB48_07180 (gcvP)
Enzymes [BR:
rhf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
EUB48_07180 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QDL37091
UniProt:
A0A515D9K4
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All DBs
Position
complement(1486894..1489857)
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AA seq
987 aa
AA seq
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MTPTLVTSCTALPPEGANFSRGGPSKNCSPLALAELENAHEFVARHIGIDAADEALMLGV
VGAASRRELIDGIVPRSIARRSKMDIPAAVTEAAALAELRAMAAKNQVFKSFIGQGYYGT
HTPGVILRNVLENPAWYTAYTPYQAEISQGRMEALVNFQTMVCDLTAMPIANASMLDEAT
SAAEAMTLAKRSVKSKSNRFIVAGDCHPQTIEVIQTRARPLGIEVVLANSREEWNELLAG
DYFAVLAQYPATSGRIDDLHAEAAKVHGKQAAFIVAADLLALTLIVPPGEFGADIVVGTT
QRFGMPMGAGGPHAAYLACRDEFKRSMPGRLVGVSIDVHGNPTYRLALQTREQHIRREKA
TSNICTAQVLPAVVASMYAVYHGPEGLKRIARRVASYTAILAKGLEQLGQAPRPGGAFDT
LSLRTGDATKAIASRAHSMRANLRIHFKEYLCISLDETTTRADIELLWSVFAKPGQTLPR
VSDFEKGIEPLIPTELRRTSAYLAHPVFNTHHSETGMLRYIRALSDKDLALDRSMIPLGS
CTMKLNATSEMIPITWPEFANIHPFAPRDQQQGYAELDEQLRAWLCQATGYAGISLQPNA
GSQGEYAGLLAIKAFHESKGQGHRNICLIPSSAHGTNPASAHLAGLQVVVTACDVNGNVD
MADLQAKCEQHSEKLACVMITYPSTHGVFEMQVKELCALVHQHGGRVYVDGANMNALVGI
AAPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVCVVEDLVPFLPGHASGGLPVHAVGAVS
AAPLGNAAVLPISWMYCRMMGPEGLQQATEIAILSANYISARLKDHYPTLYASENGHVAH
ECILDLRPLKDTSGVSAEDVAKRLIDYGFHAPTLSFPVAGTLMVEPTESETLDELDRFIA
AMIAIREEIRRIEKGQWPQDDNPLKAAPHTAASLLKGEWNHAYSRDVGAAVLSKTQHAKY
WPPVGRVDNVYGDRNLFCSCVPISDYA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacccccacacttgtcacttcgtgtactgcgttgccccccgagggggctaacttttcc
aggggcggcccgtcgaaaaattgctccccccttgcgcttgcggagcttgaaaacgcccat
gaattcgtggcccgccatatcggcatcgacgcggccgacgaggcgctgatgcttggcgtg
gtcggcgccgcctcgcgccgcgagttgatcgacggcatcgtgccgcgctcgatcgcgcgc
cgcagcaagatggacattcccgccgccgtgaccgaggccgccgcgctggcagagctgcgg
gccatggctgccaagaaccaggtgttcaagagcttcatcggccagggctattacggcacc
catacgccgggggtgatcctgcgcaacgtccttgaaaatcccgcctggtacaccgcctac
acaccctaccaggccgagatttcgcagggccgcatggaggcgctggtcaacttccagacc
atggtgtgcgacctgaccgcgatgccgatcgccaacgcctccatgctcgacgaggcgacc
tccgcggccgaggccatgacgctggccaagcgcagcgtcaagagcaaaagcaaccgcttc
atcgtggccggcgactgccatccgcagaccatcgaggtcatccagacccgcgccaggcca
ctgggcatcgaggtcgtgctcgccaattcgcgcgaggaatggaacgagctgcttgccggc
gactattttgccgtgctggcgcagtacccggccaccagcggccgcatcgacgacttgcat
gccgaggcggcaaaggtgcacggcaagcaggcagctttcatcgtcgcggcggacctgctg
gcgttgacgctgatcgtgccgcccggcgaatttggcgccgacatcgtggtcggcaccacg
cagcgcttcggcatgccgatgggcgccggtggcccgcacgccgcctacctggcctgccgc
gacgagttcaagcgctccatgccggggcgtctggtgggcgtgagcatcgacgtgcacggc
aacccgacctaccggctggcgctgcaaacgcgcgagcagcacatccgccgcgagaaagcc
acctccaacatctgcacggcgcaggtgctgccggcagtggtggccagcatgtacgcggtc
taccacggccccgaaggcctcaagcgcatcgcccggcgcgtggccagctatacggccatc
ctggccaagggactggagcagctcggacaggcaccgcgccccggcggcgccttcgacacg
ctcagcctgagaaccggcgacgctacgaaagcgatagcttcccgcgcccactccatgcgg
gccaacctgcgaattcacttcaaagaatacctgtgcatctcgctcgacgagaccaccacg
cgcgccgacatcgaactgctctggtcggtctttgccaagcccggccagacgctgccccgg
gtcagcgattttgaaaaaggcatcgagccgctgatccccaccgagctgcgccgcaccagc
gcctacctggcgcacccggtgttcaacacgcaccactccgagaccggcatgctgcgctac
atccgcgcgctgtccgacaaggacctggcgctggaccgcagcatgatcccgctgggcagc
tgcaccatgaagctcaacgccaccagcgagatgatccccatcacctggcccgagttcgcc
aacatccacccgttcgcgccgcgcgaccagcagcagggctacgccgaactcgacgagcag
ctgcgcgcctggctatgccaggccacgggctatgcgggcatcagcctgcagcccaatgcg
ggctcgcagggcgagtacgcgggcctgctcgcgatcaaggccttccatgaatccaagggc
cagggccaccgcaacatctgcctgatcccctcctccgcccacggcacgaatccggccagc
gcgcacctggccggcctgcaggtggtggtgacggcctgcgacgtcaacggcaacgtggac
atggccgacctgcaggccaagtgcgaacagcacagcgaaaaactggcctgcgtgatgatt
acctacccgagcacgcacggcgtgttcgagatgcaggtcaaggagttgtgtgcgctggtg
caccagcacggcgggcgcgtctacgtggacggcgccaacatgaacgcgctggtcgggatc
gccgcgcccggcgagtttggcggcgacgtgagccacctgaacctgcacaagaccttctgc
atcccgcacggcggcggcggccccggcgtcggcccggtgtgcgtggtggaagacctcgtg
ccgttcctgcccggccacgcgtcgggtggactgccggtgcatgcggtcggcgcggtctcc
gccgcgccattgggcaatgcggccgtgctgccgatcagctggatgtactgccgcatgatg
ggccccgaaggtttgcagcaggcgaccgagatcgcgatcctgtccgccaactacatcagc
gcgcgcctgaaggaccactaccccacgctgtacgccagcgaaaacggtcacgtggcgcac
gaatgcatcctggacctgcgaccactgaaagacaccagcggcgtgagcgccgaggacgtg
gccaaacgcctgatcgactacggctttcacgcgcccacgctgagcttcccggtggccggc
accttgatggtggagccgaccgagagcgagacgctggacgagctcgaccgcttcattgcc
gcgatgatcgcgatccgcgaggaaatccgccgcattgaaaagggccagtggccgcaggac
gacaacccgctcaaggcagcgccgcataccgctgcgagtcttctcaagggcgagtggaat
cacgcctattcgcgcgatgtcggcgccgccgtgctgagcaagacccagcacgccaagtac
tggccgccggtcggccgcgtggacaacgtatacggcgaccgcaacctgttctgcagctgc
gtgccgatcagcgactacgcgtaa
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