Rhodoferax sediminis CHu59-6-5: EUB48_12190
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Entry
EUB48_12190 CDS
T06165
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
EUB48_12190
Enzymes [BR:
rhf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EUB48_12190
Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EUB48_12190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
LPAM_1
DUF6491
LysC
Motif
Other DBs
NCBI-ProteinID:
QDL37950
UniProt:
A0A515DC61
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All DBs
Position
2534175..2534717
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AA seq
180 aa
AA seq
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MRKSAIPVLAVLTLVLAGCSSAPPRPDVAALSPSTTQPAQALAATPPTAGDDRSDAATAA
DAPAAAVVPTAQRGLASWYGPRFHGRRTASGERFDMHALTAAHLKLPLGSYARVTLLSSG
KSVVVRITDRGPHAAHRVIDLSRAAAVQLGLLKRGVGEVAVQQVAPPDQVALAGQANSAE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatccgccatccccgttcttgcggtgctgacgctggtcctggccggctgcagc
agcgcaccgccgaggcccgacgtggcagcgctctcgccctcaacgactcagccggcgcag
gcactggccgcaactccaccgaccgcaggcgacgacaggtctgatgccgccacggcggcc
gacgcaccagcggcagccgtggtcccgacggcgcagcgtggccttgcgagctggtatggt
ccccgcttccatggccggcgcaccgcttcgggcgaacgctttgacatgcatgcgctgacc
gcggcccacctcaaactcccgctgggcagctacgcccgtgtgacgctgctgagcagtggc
aagagtgtggtggtgcgcatcaccgaccggggcccgcacgcggcgcaccgcgtcatcgac
ctgagccgggctgccgccgttcagctcggcctgctcaagcgcggcgtgggcgaggtcgcg
gtgcaacaggtcgccccgcccgatcaggtcgccctggccggccaagccaattcggccgag
taa
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