Rhodoferax sediminis CHu59-6-5: EUB48_12890
Help
Entry
EUB48_12890 CDS
T06165
Name
(GenBank) TRAP transporter large permease subunit
KO
K21393
TRAP-type transport system permease protein
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_12890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhf02000
]
EUB48_12890
Transporters [BR:
rhf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EUB48_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CR_prot_dom_plant
DUF3865
DUF6142
Motif
Other DBs
NCBI-ProteinID:
QDL38080
UniProt:
A0A515DCJ7
LinkDB
All DBs
Position
2675788..2677695
Genome browser
AA seq
635 aa
AA seq
DB search
MSHLTSETLAAHAPPANALDGLASTLSALSHSVDRGLGKVVETITAVLVVAEIIVLFAGV
VSRYVFHEPLTWSDELASIMFLWLSMLGAVVALRRGEHMRMTALVNNTRPHTRALLDTMA
TTASLAFLVLVLLPSYQYAYEESFIVTPALEINNAWRAAAIPVGMGLMIIVALLRLLRVS
SFKQIAIALAGTAAVVLAFWLAQPLLVPLGKANLIIFFVLVVAANVLSGVPIAFSFALAT
FGYLALTTQTPLVVMVGRLDEGMSHLILLAVPLFVFLGALIEMTGMAKAMIRFLASLLGH
VRGGLSYVLIGAIYLVSGISGSKIADMAAIAPVLFPEMQKRGAKPGELVALLSATGAQTE
TIPPSIVLITLGSVTGVSIAALFTGGLLPAVVLGAALCSVVWWRYRHEDLSAVERHSKIQ
IGKLLVVALPAIVLPFVIRAAVIEGIATATEVSTIGIVYSALAGLLLYRQFAWRRLMPML
VETASLTGAIIFIVGCATAMAWGLTQSGFSQDLAHLMGSLPGGAYGFLAVSIVAFIVLGS
VLEGIPAIVLFGPLLFPIARMVGVHEVHYAMVVILAMGIGLFAPPFGVGYYGACAVSKVD
PADGIKHIWGYFGALLLGLILVAAVPWFSIGLLKH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccttacgtccgaaacgctagcggcccatgcaccgcctgccaacgcgctggat
ggcctggccagcacgctgagtgccctgtcccatagcgtggacaggggcttgggcaaagtg
gtcgagacgattacggcagtcctggtggtggcagaaatcatcgtcctgtttgccggcgtg
gtctcgcgttacgtgtttcacgagccgctgacctggtcggacgagctggcttccatcatg
ttcctgtggctgtccatgctaggcgccgtcgtggcgctgcgccgcggagaacacatgcgc
atgacggcactggtcaacaataccaggccacacacacgcgctctgctggacacaatggcc
accacggcatcgctggcctttctcgtgctggtgctgcttccctcgtaccagtatgcgtat
gaagagagcttcattgtcacgccggcgctggaaatcaacaacgcctggcgtgcggcggcc
atcccggtgggcatggggttgatgatcatcgtcgctctgctgcgattgctgcgcgtcagc
agtttcaagcagatcgccattgccctggccggcacggcggccgtggtgctggctttctgg
ctggcgcaacccctgcttgtgccgctgggcaaggccaacctgatcatcttcttcgtgctg
gtggtggctgccaatgttctttccggtgttcccattgccttttcgtttgcactggccacg
ttcggctacctcgccctcaccacacagacgccactggtggtcatggtggggcggcttgac
gagggcatgtcccatttgattttgctggccgtgccgctcttcgttttcctgggtgcactg
atcgaaatgaccggcatggccaaagccatgatccggtttctcgcgagcctgttgggtcac
gtacgcggcggtctgagctacgtgctgatcggcgccatctatctggtctcgggcatctca
ggctccaaaatcgccgacatggccgcgattgcgccggtgctgtttcccgaaatgcaaaag
cgcggcgccaagccgggtgagctggtggcgctgctgtcggccaccggtgcgcagaccgaa
accattccaccttcgatcgtgctgatcacgctgggctcggtcactggcgtgtcgattgcc
gcgctcttcaccggtggtctgctgcctgctgtggtgctgggtgcggcgctgtgttcggtg
gtctggtggcgctaccgccatgaagacctgagcgccgttgagcgccacagcaaaatccaa
atcggcaagctgcttgtggtcgctctgcccgcaatcgtcctgccgttcgtcatccgcgct
gcggtgatcgaaggcatagccaccgcaacggaggtctccaccatcggcatcgtctactcg
gcgctggcaggcctgctcctgtaccgccagtttgcctggcgccggctcatgcctatgctg
gttgaaactgcgtcgctgaccggcgccatcatcttcatcgtgggctgcgccacagccatg
gcctggggacttacgcagtcaggcttttcgcaggacctggcgcatctcatgggcagcctg
ccgggcggcgcctacggcttcctcgccgtgtccatcgtcgccttcattgtgctgggcagt
gtgctcgaaggcattcctgcgattgtgttgtttggtcccctgttgttcccaattgcccgc
atggtcggcgtgcatgaggtgcactacgccatggtcgtcattcttgcaatgggcatcggc
ctgttcgcccccccttttggtgtcggctattacggcgcctgcgctgtcagcaaggtcgat
ccggccgatggcatcaagcacatctggggctactttggcgcgctgctgctgggcctgatt
ctggttgccgccgtgccgtggttctccatcggtctcctcaaacactaa
DBGET
integrated database retrieval system
