KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_13535
Entry
EUB48_13535       CDS       T06165                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhf03032]
    EUB48_13535
   03036 Chromosome and associated proteins [BR:rhf03036]
    EUB48_13535
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhf02048]
    EUB48_13535
Enzymes [BR:rhf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     EUB48_13535
DNA replication proteins [BR:rhf03032]
 Prokaryotic type
  DNA Topoisomerases
   EUB48_13535
Chromosome and associated proteins [BR:rhf03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    EUB48_13535
Prokaryotic defense system [BR:rhf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    EUB48_13535
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: QDL38196
UniProt: A0A515DCR0
LinkDB
Position
complement(2816158..2818137)
AA seq 659 aa
MATNPAVKPPEYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHVIQEVLDNSADEALAGHGK
KIRVTLHQDGSVSVEDDGRGIPFGLHPEEKAPVIELVFTRLHAGGKFDKGSGGAYSFSGG
LHGVGVSVTNALAKRLEATSYRDGTVAALVFAGGDVVEPLTLRPAGEGDRKCGTSVRVWP
DAKYFEAAALPMHELTHLLRSKAVLMPGVTVTLTIEKTREVQTWLYKGGLRDYLMQELNA
DPVIPLFEGEGFADAAHDSFAEGEGAQWCVAFTEDGQPVRESYVNLIPTSAGGTHESGLR
DGLFTAVKSFIELHSLLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVR
LVSSFVRPALELWLNEHVDYGKKLAELAIRAAQTRQRAGQKVEKRKGSGVAVLPGKLTDC
ESKDLAYNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFANTEIHDI
AVAIGVDPHGPADTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIETGHVF
VARPPLFRVDAPARGKKPASKAYALDDGELTAILDKLRKEGVRESAWTISRFKGLGEMNA
EQLWETTLNPDTRRLLPVQLGTLDFLQTENLITKLMGKGEAAARRELMELHGDAVEIDI
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggcaacgaatcctgcagtcaaaccccccgaatattccgaaggctcgatccgcgttctc
aagggcctggagcccgtcaagcagcgcccgggcatgtacacccgcaccgacaatccgctg
cacgtcatccaggaagtgctggacaactcggccgacgaggcgctggccggccacggcaag
aagatcagggtcacgctgcaccaggacggctcggtcagtgtcgaggacgacggccgcggc
atcccgttcggcctgcaccccgaagaaaaagcaccggtgatcgagctggtgttcacccgg
ctgcacgcgggcggcaagttcgacaagggcagcggtggagcctacagtttttccggcggc
ctgcacggcgtgggcgtctccgtgaccaatgcgctggcgaaacggctggaggccacctcg
taccgcgacggcacggtggcggcgctggtgtttgcgggcggggacgtggtggagcccttg
acgctgcgcccggccggcgagggcgaccgcaaatgcggtaccagcgtgcgcgtctggccc
gacgccaaatacttcgaggcggccgcgctgccgatgcacgagctgacgcacctgctgcgc
agcaaggccgtgctgatgccgggcgtgaccgtgacgctgacgatcgagaagacgcgtgaa
gtccagacctggctctacaagggcggcctgcgcgactacctgatgcaggaactgaacgcc
gatccggtgatcccgctgttcgagggcgagggctttgccgacgccgcgcacgacagcttt
gccgaaggcgaaggcgcgcagtggtgcgtggccttcaccgaagacggtcagccggtgcgc
gaaagctacgtcaacctgatccccaccagcgccggcggcacgcacgagagcgggctgcgc
gacgggctgttcaccgcggtcaagagcttcatcgagctgcattcgctgttgcccaagggc
gtcaagctgctgcccgaggacgtgtttgcgcgcgcctcgtatgtgctctcagccaaggtg
ctggacccgcagttccagggccagatcaaggaacgcctgaactcgcgcgatgcggtgcgg
ctggtctccagctttgtgcgccccgcgctggagctctggctcaacgagcatgtggactac
ggcaagaagctggccgagctcgccatccgggccgcgcagacgcgccagagggccggccag
aaggtggaaaagcgcaagggctcgggcgtggccgtgctgcccggcaagctgaccgactgc
gaaagcaaggacctggcctacaacgaggtgtttctggtggaaggcgactcggccggcggc
agcgccaagatgggccgcgacaaggaaagccaggccatcctgccgctgcgcggcaaggtg
ctcaacacctgggaggtcgagcgcgaccggctgtttgcgaacaccgaaatccacgacatc
gcggtggccatcggcgtggacccgcatggtccggccgacacgcccgatctgagcggcctg
cgctacggcaagatctgtatcttgagtgacgccgacgtcgatggctcgcacatccaggtg
ctgttgctcacgctgtttttccgccatttccccaagctgatcgagaccggccatgtgttc
gtggcgcgcccgccgctgttccgggtcgatgcgcccgcgcgcggcaagaagcccgcgtcc
aaggcctatgcactggacgatggcgagctgaccgcgatcctggacaagctgcgcaaggaa
ggcgtgcgcgagtccgcgtggaccatcagccgcttcaaggggctcggtgaaatgaatgcg
gagcagctgtgggagaccacgctgaatccggacacgcgccgcctgttgccggtacaactg
ggcacgctggactttttgcaaaccgaaaacctgatcaccaaactcatgggcaagggcgag
gctgcggcgcggcgcgaactcatggagctgcacggcgatgccgtggaaattgatatctga

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