Rhodoferax sediminis CHu59-6-5: EUB48_17040 Help Entry EUB48_17040       CDS       T06165                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism rhf  Rhodoferax sediminis CHu59-6-5 Pathway rhf03018   RNA degradation Brite KEGG Orthology (KO) [BR:rhf00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     EUB48_17040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rhf03019]     EUB48_17040 Enzymes [BR:rhf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      EUB48_17040 Messenger RNA biogenesis [BR:rhf03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      EUB48_17040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Helicase_C_2 AAA_22 ERCC3_RAD25_C Motif Other DBs NCBI-ProteinID:  QDL38797 UniProt:  A0A515DEH5 LinkDB All DBs Position complement(3527781..3529217) Genome browser AA seq 478 aa AA seqDB search MTHSFSNLSLAEPLARAVAELGYESMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFALP LLQRMLKHENSSTSPARHPVRALVLLPTRELADQVAQAIKAYAKYTNLRAAVVFGGMDMK PQTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY LPKQRITLLFSATFSPEIKRLANSYLQDPVTIEVARSNATASTVEQHFYSVNPDDKRRAL HQVLRQRGIKQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALESFKSGEV DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVSFAGGGNDVR LVADIEKLIKTKIELEPLEFEEDTPKIRDQGRINDGRRAWRDAGETGDPRDVLDAPPARA PRPQRTSHAPRDPFFDQPYQAPANDAAPAWEAAARSPGSRSISANIKPKRKVAALFKS NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt atgactcattccttttcaaatctatcgctggctgaaccgctggcacgcgccgtagccgaa ctgggctacgagtccatgacccccatccaggaacaggccattccggtcgtcctgcaaggc aaagacgtgatgggtgcggcccagaccggcaccggcaagacggccgctttcgccttgccg ctgctgcagcgcatgctcaagcacgaaaacagctcgacctcgccggcgcgccaccctgtg cgtgcgctggtgctgctgcccacgcgcgagctggccgaccaggtggcgcaggccatcaag gcctatgccaagtacaccaacctgcgcgccgccgtggtgttcggcggcatggacatgaag ccgcagacgctggaactcaaaaagggcgtcgaggtgctggtggccacgccggggcgcctg ctggaccatattgaagccaagaacgcggtgctgaaccaggtcgaatacgtggtgctcgac gaggccgaccgcatgctcgacatcggcttcctgcccgacctgcagcgcatcctctcgtac ctgcccaagcagcgcatcacgctgctgttctcggccacgttctcgcccgaaatcaagcgc ctggccaacagttacctgcaagacccggtgacgatcgaggtggcgcgctccaatgccact gcctccaccgtcgagcagcatttctacagcgtgaaccccgacgacaagcgccgcgccctg caccaggtgctgcgccagcgcggcatcaagcaggcctttgtgttcgtgaacagcaagctc ggctgtgcccggctggcgcgctcgctggagcgcgagggcctcaagaccacggccctgcac ggcgacaagagccaggacgagcgcctgaaggcgctggagtcgttcaagagcggcgaggtc gatctgctggtgtgcaccgacgtcgccgcgcgcggcctggacatcaaggacgtgccggcg gtgttcaatttcgacgtgccgttcaacgccgaagactacgtgcaccgcatcggccgtacc ggccgcgcgggcgcctccggcctggccgtgagctttgccggcggcggcaacgacgtgcgc ctggtggccgacatcgaaaagctgatcaagaccaagatcgagctcgaacccctcgagttc gaggaagacacccccaaaatccgggaccagggccgcatcaacgatggccggcgcgcctgg cgcgacgccggggagaccggcgacccgcgcgacgtgctcgatgcgccgccggcccgcgcg ccgcgcccgcagcgtaccagccatgccccgcgcgacccgttcttcgaccagccctaccag gcccccgccaacgacgcggcccccgcctgggaagccgccgcccgctcacccggctcgcgc agcatctcggccaacatcaagcccaaacgcaaggtcgcggcgctgttcaagtcgtaa

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