Rhodoferax sediminis CHu59-6-5: EUB48_17310
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Entry
EUB48_17310 CDS
T06165
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00020
Citrate cycle (TCA cycle)
rhf00190
Oxidative phosphorylation
rhf00650
Butanoate metabolism
rhf00720
Other carbon fixation pathways
rhf01100
Metabolic pathways
rhf01110
Biosynthesis of secondary metabolites
rhf01120
Microbial metabolism in diverse environments
rhf01200
Carbon metabolism
Module
rhf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EUB48_17310
00650 Butanoate metabolism
EUB48_17310
09102 Energy metabolism
00190 Oxidative phosphorylation
EUB48_17310
00720 Other carbon fixation pathways
EUB48_17310
Enzymes [BR:
rhf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EUB48_17310
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
FAD_oxidored
Pyr_redox_3
ThiF
NAD_binding_7
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QDL38847
UniProt:
A0A515DEM9
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Position
3589425..3591215
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AA seq
596 aa
AA seq
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MTYSVTKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGASLG
NMNEDNWHYHFYDTVKGGDWLGDQDAIEFMCREAPNVVYDLEHMGMPFDRNADGTIYQRP
FGGHTANYGEKAVERACAAADRTGHAMLHTLYQQNVKAKTSFFVEWMALDLIRDADGDVI
GVTALEMETGDVHILQAKTTLLATGGAGRIFAASTNAYINTGDGLGMAARAGIPLQDMEF
WQFHPTGVAGAGVLLTEGCRGEGAILINGNGERFMERYAPTLKDLAPRDFVSRSMDQEIK
EGRGCGPNKDYLLLKLDHLGAETIMKRLPSVLEIGHNFANVDITKEPIPVVPTIHYQMGG
IPTNIHGQVVTQNAENKSEVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHI
VEFNKQSKAHKPLPADAADLPLARLARLDGASSGEYAQDVANALRASMQHHAGVFRTQAI
LDEGVVQIAEMRKRVEAINLKDKSKVFNTARIEALEVENLIEVAQATIISAAARHESRGA
HSVAEYGDTPENPLGRNDTEWLRHTLWHKEGNRLSYKPVQMKPLTVDSIALKTRTF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacttattccgttaccaaacgaaaattcgacgttgtcatcgtcggggccggcggctcc
ggcatgcgcgcatcgctgcaactggcgcgcgccggcctgaacgtggccgtgctctccaag
gttttccccacgcgctcgcacacggtggcggcgcagggcggcatcggcgcctcgctgggc
aacatgaacgaggacaactggcactaccacttctacgacaccgtcaagggtggtgactgg
ctgggtgaccaggacgcgatcgagttcatgtgccgcgaagcgcccaacgtggtgtacgac
ctggaacacatgggcatgccgttcgaccgcaacgccgacggcaccatttaccagcgcccg
tttggcggccacaccgccaactacggcgaaaaagcggtcgagcgcgcctgcgcggcggcc
gaccgcaccggccacgccatgctgcacacgctgtaccagcaaaacgtcaaggccaagacc
agctttttcgtcgaatggatggcgctggacctgatacgggacgccgacggcgacgtgatc
ggcgtcaccgcgctggaaatggaaaccggcgacgtccacatcctgcaggccaagaccacc
ttgctggccacgggcggtgccggacgcatctttgcggcctccaccaacgcctatatcaac
accggcgacggcctgggcatggcggcacgtgccggcatccctttgcaggacatggagttc
tggcagttccacccgaccggcgtggccggcgccggcgtgctgctcaccgaaggctgccgc
ggcgagggagcgatcctgatcaatggcaatggcgaacgcttcatggagcgctatgcgccg
accctgaaagacctggcgccgcgcgacttcgtctcgcgctcgatggaccaggagatcaag
gaaggccgcggctgcggcccgaacaaggactacctgctgctcaagctggaccacctcggt
gccgagaccatcatgaagcgcctgccctcggtgctcgagatcgggcacaactttgccaac
gtcgacatcaccaaggagccgattccggtggtgccgacgatccactaccagatgggcggc
atcccgaccaatatccatggccaggtggtcacgcaaaacgcggagaacaaaagcgaggtc
gtgaacggcctgtacgcggtgggcgaatgctcctgcgtgagcgtgcacggcgcaaaccgc
ctgggcaccaattccctgctggacctgctggtgttcggccgcgcggccggcaaccacatc
gtggagttcaacaagcagagcaaggcgcacaagccgctgcccgcggatgcggcggacctg
ccgctggcccggctggcgcgcctggatggtgccagcagcggcgaatacgcgcaggacgtg
gccaacgccctgcgggcttccatgcagcaccatgcgggcgtgttccgcacgcaggcgatc
ctggacgaaggcgtggtgcagattgccgaaatgcgcaaacgtgtcgaagccatcaacctc
aaggacaagtccaaggtgttcaataccgcgcgcatcgaggcgctggaagtcgagaacctg
atcgaggtcgcgcaggccaccatcatctccgccgcggcacgccacgagagccggggcgcg
cacagcgtggccgaatacggcgatacgcccgaaaacccgctcgggcgcaacgacaccgag
tggctgcggcacacgctgtggcacaaggagggcaaccgcctgagctacaagccggtccag
atgaagccgctcaccgttgacagcattgcgctgaaaacccgcaccttctga
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