Rhodoferax sediminis CHu59-6-5: EUB48_17435
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Entry
EUB48_17435 CDS
T06165
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUB48_17435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhf03019
]
EUB48_17435
03009 Ribosome biogenesis [BR:
rhf03009
]
EUB48_17435
03036 Chromosome and associated proteins [BR:
rhf03036
]
EUB48_17435
Enzymes [BR:
rhf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EUB48_17435
Messenger RNA biogenesis [BR:
rhf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EUB48_17435
Ribosome biogenesis [BR:
rhf03009
]
Eukaryotic type
90S particles
RNase
EUB48_17435
Prokaryotic type
rRNA processing factors
EUB48_17435
Chromosome and associated proteins [BR:
rhf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EUB48_17435
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
RM44_endonuclase
dsrm
Motif
Other DBs
NCBI-ProteinID:
QDL38871
UniProt:
A0A515DEM7
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All DBs
Position
complement(3615435..3616118)
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AA seq
227 aa
AA seq
DB search
MTGGLASLQARLQHSFSDSRLLERAVTHRSFSSDHNERLEFLGDSVLSLAVSSLLYDRLR
DLPEGDLSRIRANLVKQDTLHRLALELGLSSVIRLGEGEARSGGQKRPSILADVLEALIG
AVYLDAGYGTAEALVHRLFQAVEINPTMQAIGKDPKTELQEWLQGRKMKLPSYRVVGTLG
AAHKQTFDVECEITELGATERGIGGSRRAGEQAAAAAMLTHLKAKIK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcggcctcgccagcctgcaagcacgcttgcagcacagcttttccgattcccgc
ttgcttgagcgtgccgtcacgcaccgcagcttttcttccgaccataacgagcgtctcgaa
tttctgggcgactccgttctgagcctggcggtttccagcctgctgtacgacaggctgcgt
gacctgcccgagggcgatctgtcgcgcatccgcgccaacctggtcaagcaggacacgttg
caccggctggcgctggaactgggcctgtccagtgtgatccgtctcggggagggtgaggcc
cgctccggcggccaaaagcgcccctcgatcctggccgatgtgctcgaggccctgatcggg
gccgtctacctggatgcgggctacggcacggccgaggcactggtacaccgcctgttccag
gcggtcgagatcaaccccacgatgcaggccatcggcaaggaccccaagaccgagttgcag
gaatggctgcaggggcgcaagatgaagctgccaagctaccgcgtggtgggcaccctgggc
gcggcccataagcagacgtttgacgtggaatgcgaaatcaccgaactgggcgccaccgag
cgtggcattggcggctcgaggcgcgccggtgaacaggccgcggcggcggcgatgctgacc
cacctgaaagcgaagatcaaatga
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