Rhodoferax sediminis CHu59-6-5: EUB48_17455
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Entry
EUB48_17455 CDS
T06165
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf01503
Cationic antimicrobial peptide (CAMP) resistance
rhf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_17455
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
EUB48_17455
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhf01002
]
EUB48_17455
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rhf03110
]
EUB48_17455
Enzymes [BR:
rhf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
EUB48_17455
Peptidases and inhibitors [BR:
rhf01002
]
Serine peptidases
Family S1: chymotrypsin family
EUB48_17455
Chaperones and folding catalysts [BR:
rhf03110
]
Other chaperones and cochaperones
DegP / HtrA
EUB48_17455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_Tricorn
Peptidase_S46
Pept_S41_N_bact
Peptidase_S29
PDZ_1
Motif
Other DBs
NCBI-ProteinID:
QDL38875
UniProt:
A0A515DEP9
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All DBs
Position
complement(3619873..3621354)
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AA seq
493 aa
AA seq
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MLHIDWKKMRVRAGSFAAAGALALAAGTAALVPTGPVAAQTRTLPDFTDLVEQVGPSVVN
IRTLEKAPADADAGSNPDADMQEFFRRFFGVPLPGAPRQSPPRPNRSQPEEEQPRGVASG
FILTTDGYIMTNAHVVDGADEVMVTLTDKREFKAKIIGADKRSDIAVVKIDATGLPAVKI
GDVGKLKVGEWVMAIGSPFGLENTVTAGIVSAKQRDTGDYLPFIQTDVAINPGNSGGPLI
NMRGEVVGINSQIYSRSGGFMGISFAIPVDEAIRVSDQLRATGRVSRGRIGVQIDEVTKD
VAESIGLGKPVGALVRGVESGSPADKAGVQPGDVITRFDGKAIDKATDLPRLVGNTKPGT
RSLLTVFRRGASKDLAITIAEIEPDKTVKTTARNEKPKAASAAQSLGLSVSDLSAEQKKE
LKLKGGVKVDAVTDAAQRAGLREGDVIMAVANTPVSNVREFDAAVTKADKSKPVNVLFRR
GDWAQYALIRQAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatatcgactggaaaaaaatgcgtgtcagggcgggctcgttcgcggctgccggg
gcgctcgcgctggcggccggcacggctgccctggtgccgaccgggcccgtggcggcgcaa
acgcgcacgctgcccgacttcaccgatctggtggagcaggtggggccgtcggtagtgaac
atccgcacgctggagaaagcgccggccgacgccgacgcgggcagcaatccagacgccgac
atgcaggaattcttccggcgcttttttggcgtgccgctgcccggcgcgccgcgccagtca
ccgccgcgcccgaaccgctcgcaaccggaagaagagcagccgcgcggcgttgcctccggc
ttcatcctcaccacggacggctacatcatgaccaatgcgcacgtggtcgatggcgccgac
gaagtcatggtgacgctgaccgacaagcgcgagttcaaggccaagattattggcgccgac
aagcgcagcgatatcgccgtggtgaagattgacgccaccggcctgccggccgtgaaaatc
ggcgacgtgggcaagctcaaggtcggcgagtgggtgatggcgatcggctcgccgttcggc
ctggaaaacaccgtgactgccggcatcgtgagcgccaagcagcgcgacaccggcgactac
ctgccgttcatccagaccgacgtggccatcaacccgggcaactcgggcggccccctgatc
aatatgcgcggcgaagtggtgggcatcaacagccagatctactcgcgctcgggcggcttc
atggggatttcgtttgcgatccccgtggacgaggccattcgcgtgagcgaccagctgcgt
gccaccgggcgcgtgtcgcgcgggcgcatcggcgtgcagatcgacgaggtcaccaaggac
gtggccgagtcgatcgggctgggcaagccggtgggggcgctggtgcgcggcgtcgagagc
ggctcgccggccgacaaggcgggcgtgcagccgggcgacgtcatcacgcgcttcgacggc
aaggcgatcgacaaggcgaccgacctgccgcgcctggtgggcaacaccaagcccggcacg
cgcagcctactcacggtgttccgccgcggcgcctccaaggatctggctatcaccatcgcg
gagatcgaacccgacaagaccgtcaagaccaccgcccgcaatgaaaaaccgaaggccgcc
agcgccgcgcagtcgctgggcctgtcggtcagtgacctgtcggcggagcagaaaaaagag
ctcaagctcaagggcggcgtgaaggtcgacgcagtgaccgacgcagcacagcgcgcgggc
ctgcgtgaaggcgatgtgattatggccgttgccaacacgccggtcagcaacgtcagggaa
ttcgacgcggccgtcaccaaggccgacaagagcaagccggtgaatgtgctgttccgccgt
ggggactgggcgcaatacgccctgatccggcaggcgcgttga
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