Rhodoferax sediminis CHu59-6-5: EUB48_17620
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Entry
EUB48_17620 CDS
T06165
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf01503
Cationic antimicrobial peptide (CAMP) resistance
rhf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_17620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
EUB48_17620
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhf01002
]
EUB48_17620
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rhf03110
]
EUB48_17620
Enzymes [BR:
rhf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
EUB48_17620
Peptidases and inhibitors [BR:
rhf01002
]
Serine peptidases
Family S1: chymotrypsin family
EUB48_17620
Chaperones and folding catalysts [BR:
rhf03110
]
Other chaperones and cochaperones
DegP / HtrA
EUB48_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
PDZ_Tricorn
PDZ_1
Peptidase_S46
DUF6288
Peptidase_S29
TylF
Peptidase_S7
Motif
Other DBs
NCBI-ProteinID:
QDL38905
UniProt:
A0A515DET8
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All DBs
Position
3654856..3656349
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AA seq
497 aa
AA seq
DB search
MKTVSLKSTRLVIALLAAGVIGGAGVTAFHAERAHAAPAPVVATSLSPSSITPTALPDFA
QITQRYGPAVVNITVTGLTKTSNELPMAGRNGQDDPFGNDPFFEFFRRFQQGQGGQGVPR
EVPSRAEGSGFIINPNGIILTNAHVVRNAKEVIVKLTDHREFRAKVLGADPKTDVAVLKI
DARNLPVVALGSSRDLRVGEWVLAIGSPFGFENSVTAGVVSAKGRSLPGDSAVPFIQTDV
AVNPGNSGGPLFNTRGQVIGINSQIYSQTGGFEGLSFAIPIDTALKIEQKLAATGKVEHA
RLGVSVQDVNQTLANSFKLATPEGALVSSVEKGSPADKAGLQSGDVIQSVNGQPIVSSGD
LPPIISMDAPGDTVKLGVWRNGSATTLTAKLGDADEKTATVASSANVAGHGQLGLVLRPL
QGDEKQQAGADHGVLIEDASGPAAMAGIQSGDVLLAVNGTPVKSVEQVRSALVKSGKSVA
LLIQRGDDKIFVPVQLG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtatccctgaaaagcacacgcctggtgatcgcgctgctcgccgccggcgtc
attggcggcgccggtgtgactgccttccacgccgagcgcgctcatgcggcgccggcgccg
gtggtcgccaccagcctgtccccatcgagcatcaccccgacggccttgccggactttgcg
caaattacccagcgctacggcccggcggtggtcaacatcaccgttaccggcctgaccaag
acttccaatgagctacccatggccgggcgcaacgggcaggacgatccgtttggcaacgac
cctttctttgagttcttccgccgcttccagcagggacagggtggccagggggtgccgcgc
gaagttccctcgcgagccgagggttcgggcttcatcatcaatccgaacggcatcatcctg
accaatgcgcacgtggtgcgcaacgcgaaggaagtgattgtcaagctcaccgatcaccgt
gagtttcgcgccaaggtgctgggcgcggacccgaagaccgatgtggcggtgctcaagatc
gacgccaggaacctgcccgtggtggcgctgggcagttcccgcgacctccgggtaggcgag
tgggtgctggccattggctcaccgttcggctttgaaaactccgtgaccgccggggtggtg
agcgccaagggccgctcgttgccgggcgacagcgccgttccgttcatccagaccgacgtg
gccgtcaatcccggcaattcgggcggcccgctgttcaacacgcgcggccaggtgattggc
atcaactcgcaaatctacagccagactggaggtttcgaagggctgtcgtttgccattccg
atcgacacggcactcaagatcgagcaaaaactggcggccaccggcaaggtcgagcatgcc
cggctaggggtctctgtgcaggacgtcaaccagacgctggcaaattccttcaagcttgcc
acgcccgaaggcgcgctggtctccagcgtggaaaaaggcagcccggccgacaaggccggc
ctgcaatcgggcgacgtgatccagagcgtgaatggccagcccatcgtgtcgtccggcgac
ctgcctcccatcatcagcatggacgcccccggcgacacggtcaagctcggagtctggcgc
aacggcagcgcgacaacgctcacggccaagctcggcgatgccgacgaaaaaactgcgacg
gtggccagcagcgccaatgtggccggccacggccagctcgggctggtactgcggcccctg
cagggcgatgaaaagcagcaagccggtgctgaccacggcgttctgatcgaagacgccagc
ggcccggcggccatggcgggcatccagtccggtgacgtgctgctggcggtcaatggcacg
cccgtcaagagtgtcgagcaggtgcgctcggcgctggtcaaatcgggcaagtcggttgcc
ttgttgatccagcgcggtgacgacaagatttttgtcccggtacaactgggttga
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