Rhodoferax sediminis CHu59-6-5: EUB48_19270
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Entry
EUB48_19270 CDS
T06165
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf02020
Two-component system
rhf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EUB48_19270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EUB48_19270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhf03000
]
EUB48_19270
Transcription factors [BR:
rhf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
EUB48_19270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HTH_24
Crp
GntR
MarR_2
TrmB
HHH_XRCC3_RpoA
HTH_41
MarR
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
QDL39210
UniProt:
A0A515DFP3
LinkDB
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Position
complement(4007419..4008126)
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AA seq
235 aa
AA seq
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MSTDLTLHQRRRMPDASELGGIPWLHALAPAERERALAELQVGDARVGDYVCRVGRPVTY
WFGVVGGLLKMSSDNAQGHTMTFTGIPPGGWFGEGTALKREPYRYNIQALRKSVVAGLPV
DTFHWLLDHSIGFNRFVMNQLNERLGQFIAAREIDRMTNADLRVARNLAALFNPTLFPGV
GEVLRITQQELAYLVGLSRQRVNEALTALQAQGMIQVEYGGLRVLDLQALRSSMV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgacctgaccctgcaccagcgccggcgcatgcccgacgcttccgagctgggc
ggcattccctggctgcatgcgctggcgccggccgagcgtgagcgggcgctggccgaactc
caggtcggcgacgcccgtgtcggcgactacgtgtgccgcgtcgggcggccggtgacttac
tggtttggcgtggtcgggggcctgctcaagatgagcagcgacaacgcgcagggccacacc
atgaccttcaccggcatcccgcccggcggctggtttggcgagggcacggcgctcaagcgc
gagccctaccgctacaacatccaggcgctgcgcaagagcgtggtggccggcctgccggtg
gataccttccactggctgctggaccactcgatcggcttcaaccgctttgtcatgaaccag
ctcaacgagcggctcggccagttcatcgcggcgcgcgagatcgaccgcatgaccaacgcc
gacctgcgcgtggcgcgcaacctggccgcgctgttcaatccgacgctgtttcccggcgtg
ggcgaggtgctgcgcatcacgcagcaggaactggcgtacctggtgggcctgtcgcgccag
cgcgtcaacgaggcgctgaccgcgctgcaggcgcagggcatgatccaggtcgaatacggc
gggctgcgcgtgctcgatctgcaggcactgcgctccagtatggtttga
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