Rhodoferax sediminis CHu59-6-5: EUB48_19275
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Entry
EUB48_19275 CDS
T06165
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00061
Fatty acid biosynthesis
rhf00071
Fatty acid degradation
rhf01100
Metabolic pathways
rhf01212
Fatty acid metabolism
rhf02024
Quorum sensing
rhf04146
Peroxisome
Module
rhf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EUB48_19275
00071 Fatty acid degradation
EUB48_19275
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EUB48_19275
09145 Cellular community - prokaryotes
02024 Quorum sensing
EUB48_19275
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhf01004
]
EUB48_19275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhf04147
]
EUB48_19275
Enzymes [BR:
rhf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EUB48_19275
Lipid biosynthesis proteins [BR:
rhf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EUB48_19275
Exosome [BR:
rhf04147
]
Exosomal proteins
Exosomal proteins of breast milk
EUB48_19275
Exosomal proteins of breast cancer cells
EUB48_19275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
TMP_C
DUF2464
Motif
Other DBs
NCBI-ProteinID:
QDL39885
UniProt:
A0A515DHK1
LinkDB
All DBs
Position
4008271..4010217
Genome browser
AA seq
648 aa
AA seq
DB search
MPTTFPRLLLKHATERPAAPAMREKEYGIWQTRNWADMAALVEQVACGLHEMGLQRGEHM
VVIGSNRPQLYATLLAIQSLGAIPVPLYQDAVAAECVFPITNAEVRFAFAEDQEQVDKLL
EIRDRCPQLSNVFYEDPRGLRHYAEPGLMALDALIESGKAFAAANPGFFKSAVEQVSPHD
VAGMFYTSGTTGNPKGVVHTHYSLLDRARAGAEFDHLTNKEEVLAYLPPAWIGQNIFSYA
QWLCCGYVVNCPESASTVTIDLKEVGPTYYFAPPRIFEGLLTGVMIRMEDASRLKRAMFH
SFMDVARRVGPALMDGKPVGFVDALLYKLGNALVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNQARADTVGVPIQGVQIRVADNGELLVKSA
GLLKEYYKNPSATAEVLSADGWYHTSDAGFLDASGHLKIIDRVKDVGRLKGGAFDGAMFA
PKYVENKLKFFPHIKEVVAYGDGRDKVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYQLIKECVEKVNADLSADTLLAGSQISRFLVLHKELDADDGELTRTNKVRRGFIAEKYQ
PLVDALYGGKSEQFIETVVKFEDGRSGSVSATLKISDAKTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgtttccccgactgctgctaaaacatgccaccgagcggcccgctgcgccg
gctatgcgtgagaaggaatacggcatctggcagacccgcaactgggccgacatggccgcg
ctggtcgagcaggtggcgtgcggcctgcacgagatggggctgcagcgcggcgagcacatg
gtcgtgatcggctcgaaccgcccgcagctgtacgccaccctgctggcgatccagtcgctc
ggggccattccggtgccgctgtaccaggacgcggtggctgccgagtgcgtatttcccatc
accaatgccgaggtgcgcttcgcgtttgccgaggatcaggagcaggtcgacaagctgctg
gaaattcgcgacaggtgcccgcaactctcgaatgtcttttacgaggacccacgcggcctg
cgccattacgcagagccgggcctgatggcgctggacgccttgatcgaatccggcaaggct
ttcgccgccgccaacccggggtttttcaaatccgccgtagagcaggtcagcccgcacgat
gtggcgggcatgttctacacctccggcaccacgggcaaccccaagggcgtggtgcacacg
cactactcgctgctcgatcgcgcgcgggccggcgccgaattcgaccacctcaccaacaaa
gaggaagtgctggcctacctgccgccggcctggatcgggcagaacatcttcagctacgcc
cagtggctgtgctgcggctatgtggtcaactgccccgaaagcgccagcaccgtcacgatc
gacctcaaggaagtcggccccacctactactttgcgccgccgcgcatcttcgagggcctg
ctgaccggcgtgatgattcgcatggaagacgccagccgcctcaagcgggcgatgttccac
agcttcatggacgtggcccggcgcgttggccccgccctgatggatggcaaaccggtgggt
ttcgtggacgcgctgctctacaagctgggcaacgccctggtgtacggcccgctgcgcaac
aacctgggcttcagccgcgtgcgtgtggcctatacggccggcgaagccataggtccggac
ctgttcaccttttaccgctcgatcggcatcaacctcaagcagctgtacggctcgaccgag
accgccgtgttcgtctgcctgcagcccgacaaccaggcgcgcgccgatacggtgggcgtg
cccatccagggcgtgcagatcagggtggcggacaacggcgagctgctggtcaagtcggcc
ggcctgctcaaggaatactacaaaaaccccagcgccacggccgaggtcttgagcgccgac
ggctggtaccacaccagcgacgccggctttctggacgccagcgggcacctcaagatcatc
gaccgcgtgaaagacgtgggccgcctcaagggtggcgccttcgacggcgcgatgttcgcg
cccaagtatgtggagaacaagctcaagttcttcccgcacatcaaggaagtggtggcctat
ggcgacggccgcgacaaggtctgcgtgatgatcaacatcgacttcgacgccgtgggcaac
tgggccgagcggcgcaacctgccctatgccggctacaccgacctggcgcaaaagcccgag
gtgtatcagctcatcaaggagtgcgtggaaaaggtcaatgccgacctcagcgccgacacc
ctgctggcgggctcgcagatcagccgcttcctggtgttgcacaaggagctcgatgccgat
gacggcgagctgacgcgcaccaacaaggtccgccgcggcttcatcgcggaaaaataccag
ccgctggtggacgcgctgtacggcggcaagagcgaacagttcattgaaaccgtggtgaag
ttcgaggacgggcgcagcggcagtgtcagcgcgaccctgaagatcagcgacgccaaaacc
ttcgcgcccgtgaaggcagccgcatga
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