KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_20375
Entry
EUB48_20375       CDS       T06165                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf00550  Peptidoglycan biosynthesis
rhf01100  Metabolic pathways
rhf01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EUB48_20375 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    EUB48_20375 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhf01011]
    EUB48_20375 (mrdA)
Enzymes [BR:rhf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     EUB48_20375 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:rhf01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   EUB48_20375 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer bDLD3 Wzy_C_2
Other DBs
NCBI-ProteinID: QDL39416
UniProt: A0A515DG67
LinkDB
Position
complement(4221388..4223334)
AA seq 648 aa
MTELRNIEAELARFRRRVLVASLVVLVAFGLLVARLMFLQIVRHDDLAEQAESNRTAIVP
TVPNRGLIEDRNGIILANNYSAYTLEITPSKAGPLEQTIAALAQVIDITPRDRKRFKKLL
EESKSFESLPIRTRLSDEEVAKFAAQRYRFPGVEIKARLFRNYPFGELASHAIGYIGRIN
QAEKDRIDDSDDEANYRGTDYIGKLGIEQSYERQLHGTTGVEEMETSAAGRAVRRLASIA
ATPGDTVKLSIDIRLQKLVEDMYGDRRGALVALDPRTGEVLAFVSKPTFDPNMFVDGIDS
DNWQALNESLDKPLLNRALRGTYPPGSTYKPFMALAALETGKRTPQQSISDPGYFMLGGH
KFRDDKEGGHGTVNMYKSIVESCDTYYYMLANDLGVDTIHDHMKPFGFGELTGIDIQGEL
RGLLPSTEWKRTAYRRADQQKWYAGETISLGIGQGYNHFTVLQLARATAMLVNNGMKIKP
HLAKEVIDAVTHKAEPVVHEAPERIDVRPENLAVIKNAMVGVNLQGTSAASFRGAPYTSG
GKTGTAQVLEIKQNEKYHAGKIAERLRDNALFTAFAPAEDPKIVIAMVVENGGFGAQAAA
PMARRIFDYWLLGQYPSEEDIAAVQKAQATAPIGKPRRVQDVPWPPEP
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgaccgagctgcgcaacatcgaagccgagcttgcgcgctttcgccggcgcgtgctggtg
gccagcctggtggtgctggtggcgttcgggctgctggtcgcgcgcctgatgttcctgcag
atcgtgcgccatgacgatctggccgagcaggccgagagcaatcgcaccgcgatcgtgccg
acggtgccgaaccgcgggctgatcgaggaccgcaacggcatcattctggccaacaattac
tccgcctacacgctggagatcacgccgtccaaggccggcccgctggagcagaccatcgcc
gcgctggcgcaggtgatcgacatcacgccgcgcgaccgcaagcgcttcaagaagctgctg
gaagagtccaagagctttgagtcgctgccgattcgcacccgcctgagcgatgaggaagtc
gccaaattcgcggcgcagcgctatcgttttccgggcgtcgaaatcaaggcgcggctgttt
cgcaactatccgtttggcgagctcgcgagccacgcaatcggctacatcgggcgcatcaac
caggccgagaaggaccgcatcgacgactccgacgacgaggccaactaccgcggcaccgac
tacatcggcaagcttggcatcgagcaaagctacgagcgccagctgcatggcacgaccggc
gtggaggagatggaaacctcggccgcggggcgcgcggtgcgcaggcttgccagcattgcg
gccacgcccggcgacacggtcaagctgtcgatcgacatccggctgcaaaagctggtggaa
gacatgtatggcgatcgccgcggcgcgctggtcgcgctcgaccccaggacgggcgaggtg
ctggccttcgtcagcaagcccacgttcgaccccaacatgtttgtcgatggcatcgacagc
gacaactggcaggcgctgaacgagtcactcgacaagccgctgctgaaccgcgcgctgcgc
ggcacctacccgccgggctcgacctacaagccgttcatggcgctggccgcgctggaaacc
ggcaagcgcacgccgcagcagtcgatttccgacccgggctacttcatgctgggcgggcac
aagttccgcgacgacaaggagggcgggcacggcacggtcaacatgtacaagtcgatcgtg
gagtcctgcgacacctactactacatgctggccaacgacctcggagtggacacgattcac
gaccacatgaagccgttcggcttcggcgagctgaccggaatcgacatccagggcgagctg
cgcggcctgttgccatcgaccgaatggaagcgcacggcctaccggcgcgccgaccagcaa
aaatggtatgcgggggagaccatctcgctcggcatcggtcagggctacaaccacttcacc
gtgctgcaactggcacgggccacggccatgctggtgaataacggcatgaagatcaagccg
catctggccaaggaagtgatcgatgccgtcacgcacaaggcggagcctgtggtgcacgag
gcgcctgagcggatcgacgtcaggcccgagaacctggcggtgatcaagaacgccatggtc
ggcgtcaacctgcagggcacctcggccgcgagctttcgcggtgcgccctacaccagcggg
ggcaagaccggtaccgcccaggtgctcgagatcaagcagaacgagaagtaccacgccggc
aagatcgccgagcgcctgcgtgacaacgccctgttcacggcctttgcgccggccgaggac
ccgaagatcgtgatcgccatggtggtcgagaacggcggctttggcgcacaggccgcggcg
ccgatggcgcgccgtatctttgactactggctgctcggccagtaccccagcgaagaagac
atcgcggcggtgcaaaaggcgcaggccacggcgccgatcggcaaaccgcgccgcgtgcag
gacgtgccctggcccccggaaccctag

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