Rhodoferax aquaticus: EXZ61_00015
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Entry
EXZ61_00015 CDS
T06176
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhg
Rhodoferax aquaticus
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhg03032
]
EXZ61_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhg03400
]
EXZ61_00015 (gyrB)
Enzymes [BR:
rhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EXZ61_00015 (gyrB)
DNA replication proteins [BR:
rhg03032
]
Prokaryotic type
DNA Topoisomerases
EXZ61_00015 (gyrB)
DNA repair and recombination proteins [BR:
rhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXZ61_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
LysM
Motif
Other DBs
NCBI-ProteinID:
QDL56586
UniProt:
A0A515EV80
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All DBs
Position
2765..5317
Genome browser
AA seq
850 aa
AA seq
DB search
MHTGEGGAGSSNFQPTIDTNQAGATEAYGEGSIQILEGLEAVRKRPGMYIGDTSDGTGLH
HLVFEVVDNSIDESLAGHCDDILVTIHSDNSISVVDNGRGIPTGIKLDDKHEPKRSAAEI
ALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRDGKVHVMEFSKGFVQNR
IVETQNGIEVSPMKVIGDTEKRGTEVHFLPDTDIFKENNDFHYEILSKRLRELSFLNNGV
KIRLKDERSGKEDDFSGAGGVQGFVNFINKGKTVLNPNIFHAMGDRQSDQGTNIGVEVAM
QWNSGFNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDTELAKKAKVEVTGDDMR
EGLCCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSKLLADYLQERPNDAKIIVGKII
EAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAMCEIYIVEGDSAGGSAKQGR
DRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKAGGSTGNDDFNVAKLR
YHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKAGKEELYLQGA
SDLDNFLLRVALVNASVFTGGPNGSTISGDTLSDLARKHQVAQAVIARLKNFMDAEALRS
VADGVALNLDTVADAERSAAALQAKLPDAEVAGEFDIRTDKPILRISRRHHGNVKSSVLT
QDFVHGADYAALAEAANTFKGLLSEGARVMRGEGERQKEEKVSDFREAMAWLIGQAEHAT
SRQRYKGLGEMNPSQLWETTMDPAVRRLLKVQIDDAIEADRVFTMLMGDEVEPRRDFIET
NALRAGNIDI
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtgcacacgggcgagggcggtgcgggcagctccaacttccagcccaccatcgacaccaac
caagccggcgctaccgaagcctatggcgaaggctcgatccagattcttgaaggcctggaa
gccgtgcgcaagcgtcccggcatgtacatcggcgacacatcggacggtaccggcctgcac
cacttggtattcgaagtggtggacaactccattgacgaatcgttggctggccattgcgat
gacatcctggtcaccatccactcggacaattccatcagcgtggtggacaatggccgcggc
attcccaccggcatcaagctcgacgacaagcacgaacccaagcgttcggccgctgaaatc
gcgctgaccgagctgcatgcgggcggcaaattcaaccagaacagctacaaggtgtccggc
ggtctgcacggcgtgggcgtatcctgcgtgaacgcactctccaagatgctgcgactgacg
atccgccgcgacggcaaagtgcatgtgatggagttcagcaaaggctttgtgcagaaccgc
attgtcgaaacgcaaaacggcattgaagtctcgccgatgaaagtgattggggacacagaa
aaacgcggcaccgaagtgcactttttgcccgacaccgatatcttcaaagagaacaacgac
ttccattacgagattctgagcaaacgcctgcgggaactctccttcctgaacaacggagtg
aagatccgcctgaaagacgaacgcagcggcaaggaagacgacttctctggtgcgggcggc
gtccaaggttttgtaaacttcatcaacaagggcaagacggtgttgaaccccaacatcttc
catgccatgggcgaccgccagagcgatcagggcaccaacatcggtgtggaagtggccatg
cagtggaacagcgggttcaacgagcaagtcctctgtttcaccaacaacatcccccagcgc
gacggcggcacccacctgaccggcctgcgcgccgcgatgacccgcgtgattaataagtac
attgacgacacagagctggcgaaaaaggccaaggtggaagtgacgggcgatgacatgcgc
gaaggcctgtgctgtgtactgtcggttaaagtaccagagcctaaattttccagtcagacc
aaagacaaacttgtatcgagcgaggtgcgcggcccggtagaagacatcgtgtccaaactg
ctagccgattacctgcaagaacgccctaacgacgccaagattatcgtcggcaagatcatc
gaggcagcccgtgcccgtgaggccgctcgcaaggcccgcgacatgacgcgccgcaagggc
gtgctcgacggcatgggcttgcccggcaagctggccgactgccaggaaaaagacccggcc
atgtgtgaaatctacatcgtcgagggcgactccgccggcggctcggccaaacagggccgt
gaccggaagttccaggccatcctgcccctgcgcggcaagatcctgaacgtggaaaaagcc
cgatacgagaagctgcttaccagcaacgaaatcctgacgctgatcaccgctctgggcacc
ggcatcggcaaggccggcggaagcactggcaacgacgacttcaacgtcgcaaagctgcgc
taccaccgcatcatcatcatgaccgatgccgacgtcgacggcgcgcacattcgtacgctg
ctcttgaccttcttctatcggcagatgcccgaactggtagagcgtggccacatctatatt
gcacagccaccgctgtacaaggtcaaggcaggcaaggaagagctttatctccaaggcgct
agtgatctcgacaatttcttgttgcgcgtcgctctcgtgaatgcatccgtgtttacgggt
gggcccaatggttccaccatcagtggcgatacgctgtcagatttggcacgtaaacatcaa
gtggcacaggccgtcatcgcacggttgaagaactttatggatgcagaagcattgcgaagt
gtcgctgatggcgtggcgctgaatcttgatacggttgctgatgctgaacgttcagcagca
gcgctacaagcaaaacttccagatgcagaagttgccggcgaatttgatattcgaactgat
aaacctattctgcggattagccgtaggcaccatgggaatgtcaagagcagtgtattgacc
caggattttgtgcacggtgctgactatgctgccttggctgaggcggccaacacttttaaa
ggactgctatcagaaggtgcgcgcgtcatgcgtggggaaggtgagcgacagaaggaggaa
aaggtttccgacttccgcgaggcgatggcatggttgatcggccaagcagagcatgcaaca
agccgtcaacgttacaaaggcttgggtgaaatgaacccctcacagctttgggaaactacg
atggaccctgcggtgcgtagactgttaaaagttcaaattgacgatgcaattgaggcggac
cgcgtgttcaccatgctaatgggcgacgaagtcgagccgcgccgagactttatcgaaacc
aatgcgctccgcgcaggcaatattgatatttag
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