Rhodoferax aquaticus: EXZ61_01360
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Entry
EXZ61_01360 CDS
T06176
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rhg
Rhodoferax aquaticus
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhg03400
]
EXZ61_01360 (sbcD)
DNA repair and recombination proteins [BR:
rhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXZ61_01360 (sbcD)
Archaeal homologous recombinant proteins
EXZ61_01360 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QDL52928
UniProt:
A0A515EJU2
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Position
complement(294510..295745)
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AA seq
411 aa
AA seq
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MRILHTSDWHLGQHFMGKSRQAEHQALVDWLLGAVDAHAVDAVLIAGDIFDTGAPPSYAR
ELYSQLVVRLHSAGVALLLLGGNHDSVATLGESRAMLACLSTTVVAAVGKPEDQLVVLPA
RGGKGEPGCIVCAVPFVRPRDVMQSQAGQSAHDKQLSMQAALQGYYEAVVQAGRARQAEL
HITLGRTVPLIATGHLTTVGASSNESVREIYVGALEAFPTSAFPPVDYVALGHIHKPQKV
GGLAHIRYCGSPIPLGFDEAKQTKEVLLVDLDASGLQAVTPLEVPRFQPLLSVSGNLDAL
AQAIASAAAQGSAEKPVWLEVTVMEDDYVSDLPARVSAITQGLPVEVLRVRRQRGTAAAA
LVQEALETLDELSPHDVFAKRLAQEDLSPELHAALDQRYREVLKSLTEDAV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctcagactggcatttgggccagcactttatgggcaagagccga
caggcagaacaccaagctttggtggactggctgctgggcgcagtggacgcgcatgcggta
gatgcggtgctgattgcgggcgacatttttgacaccggtgcgccgcctagctatgcgcgt
gagttgtacagccagctggtggtgcgcttgcacagcgcgggcgtggccctgctgctgctg
ggcggcaaccacgactcggtggccacactgggcgagagccgcgccatgctggcctgcctc
agtaccactgtggtggcagcggtgggcaagcccgaagaccagctggtggtgctgccggcc
cgtggcggcaagggcgagcccggctgcattgtgtgtgcggtgcccttcgtgcgcccgcgc
gacgtcatgcaaagccaagcggggcaaagcgcacacgacaagcagctttctatgcaggcc
gcgctgcaaggctattacgaggcggtggtgcaggccgggcgggcacgccaagccgagctg
cacatcacactgggccgcacggtgccgctgatagccaccgggcacctgaccaccgtgggg
gcgagtagcaacgagtcggtgcgtgagatttatgtgggcgcgctggaggcctttcccacc
tcggcatttccgccggtggactacgtagctttgggccatatccacaagccgcaaaaggtg
ggtggcctcgcgcacatccgctactgcggctcgcccatccccctgggttttgacgaggcc
aagcaaaccaaagaagtgctcttggtcgacctagacgccagcggtttgcaagctgtcacg
ccgctggaggtgccgcgctttcagcccctgctctctgtcagcggcaacttggacgccttg
gcccaggccattgccagcgccgctgcgcaaggcagcgccgagaaacctgtgtggctggaa
gtcacggtgatggaagacgactacgtgagcgacctgcccgcccgcgtcagcgccatcacc
caaggcctgccggtggaggtgctgcgcgtgcgccgccagcgtggcacggccgctgccgcg
ctggtgcaagaggcgctggagacgctggacgaactcagcccgcatgacgtgtttgccaaa
cgcttggcacaagaagacttgagccccgagctgcacgccgccctagaccagcgctaccgc
gaagtgctcaaaagcctgacggaggacgcggtatga
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