Rhodoferax aquaticus: EXZ61_04000
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Entry
EXZ61_04000 CDS
T06176
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhg
Rhodoferax aquaticus
Pathway
rhg00061
Fatty acid biosynthesis
rhg00071
Fatty acid degradation
rhg01100
Metabolic pathways
rhg01212
Fatty acid metabolism
rhg02024
Quorum sensing
rhg04146
Peroxisome
Module
rhg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXZ61_04000
00071 Fatty acid degradation
EXZ61_04000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXZ61_04000
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXZ61_04000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhg01004
]
EXZ61_04000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhg04147
]
EXZ61_04000
Enzymes [BR:
rhg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXZ61_04000
Lipid biosynthesis proteins [BR:
rhg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXZ61_04000
Exosome [BR:
rhg04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXZ61_04000
Exosomal proteins of breast cancer cells
EXZ61_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
Motif
Other DBs
NCBI-ProteinID:
QDL53405
UniProt:
A0A515EL65
LinkDB
All DBs
Position
847850..849796
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AA seq
648 aa
AA seq
DB search
MQKTFPQWLAHHARTRPTATAMREKEYGIWQALTWADLALMVEQLAAGLHQAGLRRNDHM
VVVGANRPRLYATMLAVQSLGAVPIPLYQDAAAPECVFPINNAGVCFAFAEDQEQVDKLL
EVRAQCPQLAHIYFDDPRGLRNYDVPGLAALDELLAAGKACVQIHPDLVKDEVAVGRPND
VGAMFFTSGTTGNPKGVVHTHFSLLNRALAGAEFDKLTHAEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESASTVTIDLKEIGPTYYFAPPRVFEGLLTSVMIRMEDAGALKRKMFH
AFMAVAQRVGPALQDGLPVSLGDRVLYGLGNVLVYGPLRNTLGLSRVRVAYTAGEAIGPD
LFSFYRSIGINLKQLYGSTETAVFVCLQPDNQARADTVGVPCAGVEIKVADNGEILVKSP
GLLKEYYKNPAATAEVLTADGWYHTSDAGFIDAHGHLKIIDRVKDVGRLKGGAFNDAMFA
PKYVENKLKFFQHIKEVVAYGDGREKVCVLINIDFDAVGNWAERRNLPYAGYTDLAQKPQ
VYELIKECVEKVNADLSADALLAGSQISRFLVLHKELDADDGELTRTNKVRRGFIADKYQ
VLVDALYEGKTSQFIETVVKFEDGRTGSVSATLRIADTQTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagacttttccgcaatggctggcgcaccacgctcgcaccaggcccacggccact
gcaatgcgtgagaaagagtatggcatttggcaagctttgacatgggctgacctggccctg
atggtggagcaattggcggcaggtttgcaccaagcaggcttgcgccgcaacgaccatatg
gtggtggtgggagccaatcgcccacgtctgtacgccactatgttggcagtgcaaagcctg
ggtgcggtgccgattcctttgtaccaagatgctgcagcaccggagtgcgtgtttcctatc
aacaacgcaggcgtctgctttgcctttgccgaagaccaagagcaagtggacaagttgctg
gaagttagggcgcaatgcccacagcttgcccacatttattttgacgatccaaggggcttg
cgcaattacgacgtacccggcttggctgcattggatgagctcttggctgcgggcaaggcc
tgtgtccagattcaccctgatttggtgaaagatgaggtcgcggtaggtcgccccaatgac
gtaggggctatgttcttcacgtcaggcaccacgggcaaccccaagggtgttgtgcacacc
cacttttctttgctgaaccgggcgctggccggtgctgagtttgacaagttgacccacgcg
gaagaggtgttggcttacctgccacccgcatggattgggcaaaatattttcagctacgcg
cagtggctggcttgcggttacgtggtgaattgccctgaatccgcttccaccgtcaccatc
gatttgaaagagataggccccacctattactttgcgccgccgcgcgtgttcgaaggcctg
ctcaccagcgtgatgattcgcatggaagatgccggtgcgctcaaacgcaagatgttccac
gcctttatggccgtggcccaacgcgtggggcctgccttacaagacggcttgcctgtctcc
ttgggggatcgcgtgctgtacggcctaggcaatgtgctggtctacggtccgctgcgcaat
acgctgggcttgagtcgggtgcgcgtagcctataccgccggtgaggccattggcccggat
ttgtttagcttttaccgctccattggcatcaacctcaagcagctctacggctctaccgag
accgccgtgtttgtgtgcttgcaacccgacaaccaagcccgcgccgacaccgtgggcgtg
ccatgcgccggtgtggagatcaaggtggcggacaacggcgaaattttggtgaagtcgccc
ggcttgctcaaggagtactacaaaaaccccgccgccactgccgaggtgctaacggctgac
ggctggtaccacaccagtgatgcaggctttatagatgcgcacggccacctgaagatcatc
gaccgcgtcaaagacgtgggccgcctcaaaggcggtgcgttcaacgacgccatgtttgct
cccaagtacgtggagaacaaactcaagttcttccagcacatcaaggaagtcgtggcgtat
ggcgatggccgcgagaaggtgtgtgtgctgatcaacatcgactttgatgccgtgggcaac
tgggccgagcgccgcaatctgccttatgccggctacaccgatctggcccagaagccccag
gtgtatgagctgatcaaggaatgcgtggagaaggtcaacgccgacctgagcgccgatgcc
ctgctggccggcagccagatcagccgcttcttggtgttgcacaaagaactggacgccgac
gacggtgaattgacccgcaccaacaaagtccgccgcggctttattgccgacaaataccag
gtgctggtggacgcgctgtacgagggcaagaccagccagttcatcgagaccgtggtgaag
tttgaagacggacgcaccggcagcgtcagcgccacgctgcgcatagcagacacccaaacc
tttgcccctgtgaaggctgcagcatga
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