Rhodoferax aquaticus: EXZ61_04260
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Entry
EXZ61_04260 CDS
T06176
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhg
Rhodoferax aquaticus
Pathway
rhg00061
Fatty acid biosynthesis
rhg00071
Fatty acid degradation
rhg01100
Metabolic pathways
rhg01212
Fatty acid metabolism
rhg02024
Quorum sensing
rhg04146
Peroxisome
Module
rhg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXZ61_04260
00071 Fatty acid degradation
EXZ61_04260
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXZ61_04260
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXZ61_04260
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhg01004
]
EXZ61_04260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhg04147
]
EXZ61_04260
Enzymes [BR:
rhg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXZ61_04260
Lipid biosynthesis proteins [BR:
rhg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXZ61_04260
Exosome [BR:
rhg04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXZ61_04260
Exosomal proteins of breast cancer cells
EXZ61_04260
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QDL53452
UniProt:
A0A515ELB5
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All DBs
Position
complement(896247..898106)
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AA seq
619 aa
AA seq
DB search
MSVLWDLQHLQANTQSVLSGNTIPAMFWEAVNKRSAQVWLRQKHMGLWRSHTWQQTGDAV
QEIAAGLMSLGFQKGECASTLANTVVEWVWADLAILSAGGVSNGIYPTDAASQVQYLCED
SRTTFLFVEDDEQLDKALEVRAHLPQMRKIVVFNMDGLRGLEDPDVLSLDALRQLGRSYL
QAHPGAVQAAAAACQPEDLAILVYTSGTTGKPKGAMHLHKGLVYTVRGFNTLLAQDEHDE
RMCFLPLCHIAERMGGEYFSLYTGTKLNFVENPQTVPENVREIAPTVFTAVPRVWEKLYS
GVMIALKESGRLQQAAYGWSIGVGTRIADLVLAQAPVGAGLKLQFKLAQLLALNNVRRLI
GIHRARYLVTGAAPISPELVRWYLALGVPMLEVWGMTETCGASTGVPASRIKPGSIGPAA
SFNEIRLAPDTHEILVRGPNVFAGYLNQPEKTAETIDAEGWLHTGDVGAMDADGYLRITD
RMKDILITAGGKNITPSELENDLKFSPYITDAVVIGDKRAYLTVIIMIDQENVEKFAQDA
DVPFSNYASLTRSPEVQALIQAELDRVNKKFARVEQIKKFFLLENQLSAEDEELTPTMKL
KRKLVEQKYAAQITAMYRE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttctgtgggatctccaacacctgcaagccaacacccaaagcgtgttgagcggc
aacaccatcccagccatgttctgggaagcggtaaacaagcgcagcgcacaagtgtggttg
cgccaaaaacacatgggcctgtggcgcagccacacctggcagcaaacgggcgatgccgtg
caagagattgcagcgggactgatgagcctgggcttccagaaaggcgaatgcgcgtccact
ttggcaaacaccgtggtggagtgggtttgggcagacctcgccatcctgtccgcaggtggc
gtgtccaacggtatttaccccacagacgcggccagtcaggtgcagtacctgtgcgaagac
tcgcgcaccacgtttttgtttgttgaagacgacgagcagctcgacaaggcattggaggtc
cgcgcccacttgccccagatgcgcaagattgtggtgttcaacatggacggcctgcgtggc
ttggaagacccagacgttttgagcctagacgccctgcgtcagctgggccgtagctacttg
caagcccaccccggggcagtacaagcggcagccgccgcatgccaaccagaagatcttgca
atactggtctacacctcaggcaccaccggcaagcccaaaggtgccatgcatttacacaag
ggcttggtctataccgtacgcgggttcaacaccctgctcgcccaagacgagcacgatgaa
cgcatgtgctttcttcccctgtgccacattgcagagcgcatggggggcgagtatttctcc
ctctacaccggcaccaagctcaactttgttgaaaacccccaaaccgtgccggagaacgtg
cgtgagattgctcccacggtctttactgcagtgccacgcgtgtgggaaaagctgtactca
ggcgtgatgattgcactcaaagaatcaggccgcctgcaacaggccgcgtatggctggagc
attggcgtgggcacgcgcattgccgacttggtgctggcgcaggcacctgtaggcgcgggt
cttaagctgcaattcaagctggcacaactcttggcgcttaacaatgtgcgcaggctcatt
ggtatccaccgcgcgcgttacttggtcacgggtgctgcgcctatctcgccagaattggtg
cgctggtacttggcgctcggtgttcccatgctggaagtctggggcatgaccgagacctgc
ggcgcatccacgggtgtgcccgcctcacgcatcaagcctggcagcattggcccggctgcc
agcttcaacgagatacgcttggcccctgatacccacgagattttggtgcgtggccccaat
gtgtttgcgggctacctgaaccaacctgaaaaaacggcggagaccatcgatgccgagggt
tggctgcacacgggcgatgtgggcgctatggatgctgacggctacctgcgcatcaccgac
cgcatgaaagacattttgatcactgccggggggaaaaacatcacccccagtgagttggaa
aatgacttgaagttctctccgtacatcaccgacgcggtggtcattggcgacaagcgggcg
tatctcaccgtcatcatcatgattgaccaagagaacgtcgagaaattcgcccaagacgca
gacgtaccctttagcaactatgccagcctcacccgaagccctgaggtgcaggctttgatc
caagccgaattggaccgtgtgaacaagaagtttgcacgggtcgaacaaatcaaaaaattc
tttttgctcgaaaaccagctcagcgctgaagatgaagagctcacccccactatgaagctc
aagcgcaaactcgttgagcaaaagtacgcggcgcaaatcaccgctatgtaccgcgaatag
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