Rhodoferax aquaticus: EXZ61_04360
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Entry
EXZ61_04360 CDS
T06176
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhg
Rhodoferax aquaticus
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhg03000
]
EXZ61_04360
Transcription factors [BR:
rhg03000
]
Prokaryotic type
Helix-turn-helix
Other families
EXZ61_04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
Sigma54_activ_2
AAA_lid_14
HTH_30
AAA_2
HTH_29
HTH_7
AAA_5
PAS
Mg_chelatase
HTH_22
HTH_23
Phage_CP76
PAS_8
HTH_28
HTH_17
PAS_7
HTH_Tnp_ISL3
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QDL53470
UniProt:
A0A515ELC3
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All DBs
Position
complement(919877..921820)
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AA seq
647 aa
AA seq
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MRTPSAALALRQARLHLLEHGQCLPGAIDERLARSWRRSMAAGLQPTTRMGTCDNASGGR
LRQILASNHELLAHSRPVMEYLFEQVRHSQSVVVLADQRGTLMHTLGDPNFVGRAERVAL
ACGASWHEEHRGTNAIGTALAEGSGVEIHGAEHFLERNGFLTCAAAPIMSATGTLMGILD
ISGDQRSGHPHTLGLVSTAARMIENRLLVASHRRSLRLHLHSRPEGIGSVAEGIVVLSGD
GWIVGANRQALSMLHLGPQDMGATLLERALDVRLDDLLARQKRRPQLAVQVHATDGTALF
VQLYMDAGVQSVVASDSAPQRVDASHRPAAADALAKLDTGDLRWRSAADKARRVVDKPIA
LLIQGESGVGKELFARATHDSGARRAGPFVAINCAALPEHLIEAELFGYAPGAFTGAKRE
GSKGRLREAHGGTLFLDEIGDMPLALQTRLLRVLQERSVTPVGAGTPVPVDFALVCATHC
KLREAVDAGQFRSDLYYRINGLTLILPALRERTDFQTLTERLLSTLAPERPLHVVPALLA
RLSQHPWPGNLRQYASVLRTSMAMLDAHEDAIDWQHLPDDVTQDLQEPLPSVASAPEPTQ
AAYEPQNLQALSQLAIRQTLQNCRGNVSQAARSLGISRQTLYRKMNA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccccatctgctgccttggccttgcgccaagcgcggctgcatttgctagagcac
ggccagtgcttgcccggtgccattgacgagcgactggcacgctcgtggcggcgcagcatg
gcggcgggcttgcagcccaccacgcgcatgggcacctgcgataacgccagcggcggcaga
ctgcgccagatcctggccagcaaccatgagctcttggcccactcccgcccggtgatggaa
tacctgtttgagcaagtgcgccacagccaaagcgtggtggtgctggctgaccagcgcggc
actttgatgcacaccctgggcgaccccaactttgtagggcgtgctgagcgcgtggccttg
gcctgcggcgcgtcctggcatgaagagcaccgtggcaccaatgccattggcaccgcgcta
gccgaaggcagcggcgtggagattcacggagccgagcactttttagagcgcaatggtttt
ctcacctgcgcggcagcccccatcatgtcggccaccggaacgctcatgggcattttggat
atttcgggcgaccagcgcagcggccacccccacacgctgggcttggtgagcacagcggcg
cgcatgattgaaaaccggctcttggtggctagtcaccggcgcagcctgcgcctgcatttg
cacagccgccctgagggcattggctcggtggccgaaggcattgtggtgctgtctggcgac
ggctggattgtgggtgccaaccggcaggctttgagcatgctgcaccttggtccccaagat
atgggggcgaccctgctggagcgtgccctggatgtgcgcttggacgatctcttggcgcgg
caaaagcgccgcccccaactggccgtgcaagtccatgccaccgacggtacggccctgttt
gtgcagttgtacatggacgcgggcgtgcagtccgtggtggcctcggatagcgcaccccaa
cgcgtagacgccagccaccgccctgccgcagcggatgccctcgccaaactagacactggc
gacctgcgttggcgcagtgcggccgacaaagcgcgtcgggtcgtggacaagcccattgcg
ctgcttatccaaggcgaatccggcgtgggcaaggagttgtttgcccgcgccacgcacgac
agcggagcacggcgtgccgggccctttgtggccatcaactgcgcggctctgcctgagcat
ttgattgaagccgagctgtttggctatgcccccggtgcattcaccggcgccaaacgcgaa
ggcagcaaaggccgcctgcgcgaggcccatggcggcaccttgtttttggacgagattggc
gacatgcctttggccctgcaaacccgcttgctgcgcgtgctacaagagcgcagcgtgacg
cccgtgggtgccggcacgcctgtgccagtggacttcgcgctggtgtgcgccacgcactgc
aagctgcgcgaggccgtggacgcgggccagtttcgcagcgatttgtactaccgcattaac
ggcctgaccctcatcttgcctgccctacgggaacgcacggactttcagacacttaccgag
cgcctccttagcaccttggcacctgagcgcccgctgcatgtggtacccgcgctgctggcg
cgtttgagtcaacacccttggccaggcaatctgcggcaatacgccagtgtgctgcgcacc
tccatggccatgttggacgcgcatgaagacgcgattgactggcagcatttgcccgatgat
gtgacacaagacctgcaggaaccgctgcccagtgttgcttcggctcccgaacccacacaa
gccgcttacgagccacaaaacctgcaggcactgtcgcaactggccattcggcagaccttg
caaaactgccgtggcaatgtgtcgcaagcggcgcgcagcttaggcatcagccgacaaacc
ttgtaccggaaaatgaatgcgtga
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