Rhodoferax aquaticus: EXZ61_05290
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Entry
EXZ61_05290 CDS
T06176
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rhg
Rhodoferax aquaticus
Pathway
rhg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXZ61_05290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rhg02022
]
EXZ61_05290
02035 Bacterial motility proteins [BR:
rhg02035
]
EXZ61_05290
Two-component system [BR:
rhg02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EXZ61_05290
Bacterial motility proteins [BR:
rhg02035
]
Pilus system
Twitching motility proteins
EXZ61_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PDE8A_N
AAA_16
AAA
VpsR
Motif
Other DBs
NCBI-ProteinID:
QDL53639
UniProt:
A0A515ELX9
LinkDB
All DBs
Position
complement(1116316..1117839)
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AA seq
507 aa
AA seq
DB search
MANHAVLNDAKILVIDDEPDLRTLYELTLLREGYRVDTAGSLQEAWQLLNDKSFDVVITD
MRLPDGMGVDILGGIKSQRRAERCVVITAFGSAENAVSSFKAGAFDYLTKPVDLKQFRTV
IASAVHNAAALQQTSLEASFAGKRRAAPQRHGTADTSLARLAGESASMRNVKERIVKVAR
SMAPVLIRGESGTGKELVASALHTNSHRADGPWVAVNCSAIPENLLEAEFFGAKKGAYTG
SNQDRDGFFQAAKGGTLFLDEIGDLPLSMQAKLLRAIQERCVRPIGSNQEESVDVRIVSA
THKNLPEEVTQGKFRQDLYYRINVIDIVIPPLRERMEDLPDLCHALLSKIADESGLPAPR
MSEETLRQLMQLPLHGNVRELENLLHRAVALSDGDELLFEDFEAHASHAPAFASTAAITN
ETVSDTSDKPMGTHAESAEKEVTIPADLQSHLDQQEREILVHTLKETGFNRTLAASRLGL
TLRQIRYRIARLRIDAPQAQDESNDGS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccacgctgtactgaacgacgccaaaatcttggtgattgacgatgagcccgac
ctgcgcaccttgtacgaactcacccttctgcgagaaggctatcgtgtagacaccgccgga
agcctgcaagaggcatggcaactgctcaatgacaaatcgtttgatgtggtcatcaccgat
atgcgcctgcccgatggcatgggtgtggacatactaggtggcatcaaatcccaacgccgc
gctgagcgctgcgttgtgattactgcttttggctccgcagaaaacgcggtcagctcattc
aaagccggggcttttgactacctcaccaaacccgtggacttaaagcaattcagaacggtc
attgcgtcagctgtccacaacgccgccgcactgcagcaaacgtctttggaggcttctttt
gcaggcaagcgacgtgctgcaccacagcgccatggcaccgcagacacttccttggcccga
ttggccggagagtctgccagcatgcgcaacgttaaagaacgcattgtgaaagtggcgcgt
agcatggcgcccgttttgattcggggagagtcgggaaccggcaaggagttggttgcaagt
gcgctacataccaatagccaccgcgcggatggaccttgggtcgcggtcaattgcagcgcc
attccggagaacttgctggaagctgaattcttcggtgccaaaaaaggagcctatacaggg
tccaaccaggacagagatgggtttttccaagccgccaaaggcggcacgctgtttttggac
gaaatcggcgacctgcccttgtccatgcaagccaagctcttgcgcgccatccaagagcga
tgcgtgcggcctattggctccaaccaagaagagtcggttgacgtgcgcatcgtgagcgcg
acacacaaaaatttgcctgaggaagtgacacaaggcaagtttcgccaagacctctactac
cgtatcaacgtcatagatatcgtgattccaccgttgcgagagcgcatggaagacctacct
gacctatgccacgcgctactcagcaagattgccgatgaatcgggcttgcctgcgccacgc
atgtctgaagaaactctacgccagcttatgcaactaccgttgcatggcaatgtgcgcgag
ctagaaaaccttttgcaccgtgcggtagcgctcagcgatggggatgaactactctttgaa
gactttgaggcgcatgcatcgcatgcccctgccttcgcaagcacagcggccatcaccaat
gagacggtgtccgacacttccgataagccaatgggcacccatgcagaaagtgcggagaag
gaagtcacgattcctgccgacttgcaaagtcacttggaccagcaagagcgggaaattttg
gttcacacgctcaaggaaacaggtttcaaccgcacgttggctgcgagccgattggggctg
acactgcgccagattcgctaccgtatcgctcgcctgcgaattgatgcgcctcaagcgcaa
gacgagtcaaacgatggcagctga
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