Rhodoferax aquaticus: EXZ61_11280
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Entry
EXZ61_11280 CDS
T06176
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhg
Rhodoferax aquaticus
Pathway
rhg00071
Fatty acid degradation
rhg00280
Valine, leucine and isoleucine degradation
rhg00310
Lysine degradation
rhg00362
Benzoate degradation
rhg00380
Tryptophan metabolism
rhg00410
beta-Alanine metabolism
rhg00640
Propanoate metabolism
rhg00650
Butanoate metabolism
rhg00907
Pinene, camphor and geraniol degradation
rhg00930
Caprolactam degradation
rhg01100
Metabolic pathways
rhg01110
Biosynthesis of secondary metabolites
rhg01120
Microbial metabolism in diverse environments
rhg01200
Carbon metabolism
rhg01212
Fatty acid metabolism
Module
rhg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EXZ61_11280
00650 Butanoate metabolism
EXZ61_11280
09103 Lipid metabolism
00071 Fatty acid degradation
EXZ61_11280
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EXZ61_11280
00310 Lysine degradation
EXZ61_11280
00380 Tryptophan metabolism
EXZ61_11280
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EXZ61_11280
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EXZ61_11280
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EXZ61_11280
00930 Caprolactam degradation
EXZ61_11280
Enzymes [BR:
rhg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EXZ61_11280
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EXZ61_11280
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EXZ61_11280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
Arg_decarbox_C
NAD_binding_2
CUB_M02D8_5_5th
Motif
Other DBs
NCBI-ProteinID:
QDL54703
UniProt:
A0A515EPW1
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All DBs
Position
2456072..2458231
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AA seq
719 aa
AA seq
DB search
MKTIQYTLADGIATITFDEPDSPVNTMCLQWQDDMDAVAAQVLQDKDAIKGILLASNKTT
FFAGADLKGAMRLQPTDATKIFQEIERVKKNFRTIETLGKPVVSLLNGTALGGGWEVALV
GHHRIAIDDRKTQFGLPEVTLGLLPGASGVTKMTRHLGLMGAQPYLVEGKTFNPSEAKGL
GLVHALVAPGPDAAAEMKAQALAWIAANPSAQHPWETKGYKVPGGLPSSPAVAQMLVVAP
AVIKKNTRGLYPAPEAIIACMVEGLQVDLETALRIESRYLSKLMTGTQAKAMINTFFFNL
NAIKSGQSRPAGVPRFKPSKVGLLGAGMMGAGIAYCQASKGIATVLKDVSQEKADLGKSY
SAKITQGRVDKGRMKPEAQQQILDLIHPTGNAADLQGCDLIIEAVFENRELKAKVTQESE
PLLAAGGFFASNTSTLPITGLAKASAKPEKFIGIHFFSPVDKMKLVEIIKGKQTDDETVA
RAYDYVQALGKFPIVVNDSRGFFTSRVFGTFVMEGAAMLGEGIPAAAIENAGIQAGMPVG
PLAVLDETALTLSLHVMDQTKKDFEAEGKTYTATPGELVVEKMVKEHKRPGRAGGAGFYE
YPTEKGAKKFLWPELQGLFERADSAWNITDLKDRLLYRQAVETARCLAEGVLTSVHDANI
GSIFGIGFPAWTGGAMQFIYGMGVDAFEKRAAELAQQFGPGFVLTDEVKAAIAKFQPQY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccagtacaccttggccgacggcatcgccaccatcacctttgatgagccg
gactccccggtcaacaccatgtgcctgcaatggcaagacgacatggatgccgtcgcggcg
caagttctccaggacaaagacgccatcaaaggcatcttgctggcctccaacaagaccacc
ttctttgcgggggccgacctcaaaggcgcgatgcgcctgcagcctacggacgccaccaaa
atcttccaagagattgagcgcgtcaaaaagaacttccgcaccattgagacgctgggcaag
ccggtggtcagcctgctcaatggcaccgctttgggtggcggctgggaggtggcgctcgtt
ggccaccaccgcatcgccattgacgaccgcaaaacccagtttggcttgcccgaagtcacg
ttaggcctgctgccgggcgcaagcggcgtcaccaagatgacacgccacctgggtctgatg
ggcgctcagccctacttggtggaaggcaaaaccttcaacccgagcgaagccaaaggcctg
ggcctggtgcacgcgctggtagcgcccggacccgatgccgccgctgaaatgaaagcccag
gcgctggcatggattgccgccaacccgtctgcccaacacccatgggaaaccaaaggctac
aaggtgcccggtggactgccctcatcgcccgccgtggcgcaaatgctggtggtggcaccg
gctgtcatcaagaaaaacacccgcggcctctaccccgcgcccgaagccatcatcgcttgt
atggtcgaaggtttgcaggtggacctggagaccgcgctgcgtattgaaagccgctacctg
tccaagctaatgaccgggacccaggccaaggccatgatcaatacctttttcttcaacctc
aacgccatcaagagtggccaaagccgacctgcgggcgttccccggttcaagcccagcaaa
gtgggtctgctgggcgcgggcatgatgggcgcaggcattgcctactgccaggccagcaaa
ggcattgccacggtactcaaagatgtgagccaggagaaagccgacctgggcaagagctac
agcgccaaaatcacccaaggccgcgtggacaagggtcgcatgaagcccgaggcacagcaa
cagatcctcgacctgatccaccccacaggcaatgccgcagacctgcaaggctgcgacctg
atcattgaggcggtattcgaaaaccgcgaactcaaagccaaggtgacccaagagtccgag
ccactactcgcagcaggtggtttttttgcatccaacacctccacgctgcccatcacgggc
cttgccaaagccagcgccaagcccgagaagttcatcggcatccacttcttcagccccgtg
gacaagatgaagctggtggaaatcatcaagggcaagcagaccgacgacgagactgtggcc
cgcgcctacgactatgtacaggcactgggcaagttccccattgtggtgaacgactcgcgc
ggcttcttcaccagccgcgtgttcggcactttcgtcatggaaggtgcggctatgttgggc
gaagggattcccgccgcagccattgagaacgcgggcatccaggccggcatgccggtgggc
cccttggcggtgctggacgaaaccgccctcaccttgagtctgcatgtgatggaccagacc
aaaaaagactttgaagccgagggcaagacctacaccgcaactcctggtgaactggtcgtg
gaaaaaatggtcaaagagcacaagcgccccggccgcgcaggcggtgcaggcttttacgag
taccccactgaaaaaggtgccaagaaattcctgtggcccgaactccaaggtttgtttgaa
agggccgactcagcctggaacatcacggacctcaaagaccgcctgctgtaccgccaggcg
gtcgagaccgcgcgctgcctggctgaaggcgtgctcactagcgtgcacgatgccaatatc
ggctccatcttcggcattggtttccccgcctggaccggtggcgccatgcagttcatttac
ggcatgggtgtggatgcattcgagaagcgtgctgcagagttggcgcagcaattcggccca
ggctttgtgttgacggatgaggtgaaagccgccatcgccaagttccaaccccagtactaa
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