Rhodoferax aquaticus: EXZ61_12285
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Entry
EXZ61_12285 CDS
T06176
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhg
Rhodoferax aquaticus
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhg03400
]
EXZ61_12285
Enzymes [BR:
rhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXZ61_12285
DNA repair and recombination proteins [BR:
rhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EXZ61_12285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
QDL56792
UniProt:
A0A515EVT1
LinkDB
All DBs
Position
complement(2683517..2686120)
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AA seq
867 aa
AA seq
DB search
MQQWLALGEGLLDRLAQAIWGRGVHPARTVVVLPFAHLRPLAARLWAQRFPDGFAPRFET
SMSWSTSLSPWSAGPTDIAFDAALDSLTAQAMLEQVGLGEQSAALTVLLVQVAHQIGPLA
AAVPAERRGQWAVAARAAVVLGMDSTALAWEAAVGQVAVEWAAVSTYASDVLLSPQTSTT
TDAVLVVQGLALDPIAAGLLEAWRGKAEVIPFSAPNELAPADVTAKPKQRAHLGTQLHSC
LDAEDEAQRAAACLIRHIADGRFPVALVSSDRALTRRVRAMLEASEVQIRDETGWKLSTS
HGAAQVMALLRACAWNASTDDVLAWLKGAPTYARMASEVEALARREQLRDWRKFSACSAL
KKQAHLLVAHSGIEQQRARFKGVRPLQAWLAELRLALQESGIWDTLQPDNIDSETAKHSL
IEVLRLSSPSTPEWDALQTDALWAGHRFDLAGFTTWVNQTFEGASASPAYPALEQVVILP
MSQMMGRPFAALVMAGCDEVRLNPSTDPPGNWTAAQREALGLPSREQLEEQSRWAWLGAL
ATPSCDVLWRTSDDAGETLQPSVLVQLLQLDIAMSGAPEMASACEDPRSVRHVPAQPVAR
PMPIGADVLPAQLSASAYEDLRTCPYRFFAMRQLGLQASDELDAEVDKRDFGLWLHEVLK
RFHEGLQIEPTSDRARRTTMLQAASEHSTLSMGLSEGEFLPFAAAWPAVREHYLDWCETH
DRTNARFASAETSHTQNLGPITLVGRIDRIDTLPDGSHWVMDYKTEPMAKTQARIKDPFE
DTQIAFYAALLPDDTLDAAYVNISERDATRTVPQADIVQARDALLEAILEDMTQIQSGAA
LPALGEGMACDYCKARGLCRKDFWEAP
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatggttagccttgggcgagggtttgctggaccggctagcgcaagccatatgg
gggcgcggagttcatccggctcgcacagtggttgttctgccgttcgcccatctcagaccc
ttggccgctcgattgtgggcccaacgttttcctgatggctttgcgcctaggttcgagacc
agcatgagttggagtacctcactgtccccttggtcggcagggcccacagatatcgcattt
gatgcagccctagacagcctgactgcgcaagccatgctagaacaagtaggcttaggcgaa
caatccgcagccttaacggttctcttggttcaggtagcgcaccagattggccccttggct
gcggccgttcccgcagagcgcagaggccagtgggcggtggccgcgcgtgcagcggtggtg
ctgggcatggactccactgcgctcgcgtgggaagcagcggtaggccaggtggcggtggag
tgggctgcagtttcgacctatgcaagtgatgtcttgctgtcgccacagacctcgacgacc
actgatgcagtccttgtggtgcaaggactagccctagaccctattgcggcagggttactg
gaggcatggcgaggcaaggctgaggtaatcccgttttcagcgccaaatgagttagcacct
gccgacgtgaccgcgaagcccaagcagcgtgcgcacttaggaactcagctgcacagctgt
ctagacgccgaggatgaagcacagcgtgctgccgcttgcctgattcgacacatcgcagac
gggcgttttcccgtagcactcgtctccagtgaccgcgcgcttacgcgacgcgtgcgcgcg
atgcttgaagcgtccgaagtgcagattcgtgatgaaaccgggtggaagctttccaccagt
cacggtgcagctcaagtgatggctcttttgcgcgcctgtgcttggaacgcatcgacagat
gatgtgcttgcctggctaaaaggcgcacctacttacgcacgcatggcaagcgaggtggag
gccttggcccgtcgcgaacagctgcgtgattggcgcaagttcagtgcttgttccgcactc
aagaagcaagctcacttactagtggcgcacagcggtatcgagcagcaaagagcgcgcttc
aagggcgtgcgccccctgcaggcatggcttgcagagctgcggctggctttgcaagagagt
ggcatttgggacacgctccagcccgacaacatcgactctgaaacggcaaagcacagcctg
attgaagtgctgcgcctgagcagccctagcacaccagagtgggatgctttgcaaaccgac
gctctgtgggcggggcaccggtttgacttggctggctttacgacttgggtaaaccaaacg
tttgaaggcgcaagtgcgtcaccggcctatccagcattggagcaagtcgtcattttgccc
atgagccaaatgatggggcggccctttgctgcgctggtaatggctggttgcgacgaggta
cgactgaatccttccacggacccaccaggcaactggacggctgcccagcgcgaggcactg
gggttgccgtcacgtgaacaactggaggaacaaagccgctgggcttggttgggggcctta
gctaccccgagctgtgatgtgctttggcgaaccagcgatgacgcgggcgaaacactgcaa
cctagcgtgctggttcaattgctacagctcgacatcgcgatgtccggcgctcccgaaatg
gcgagtgcctgcgaagacccgcggagcgtccggcatgtgcccgctcagccagttgcgagg
cccatgcccatcggtgctgacgtgttgcccgcgcaactttctgccagtgcctatgaagac
ttgcggacctgcccctaccgcttctttgccatgcggcagctaggtttgcaagcgagtgat
gaactggatgcagaggtagacaagcgggactttggcttatggttgcatgaggtgctcaaa
cgctttcatgagggcttgcaaattgagcccacgtcagatcgtgctcgtcggacaaccatg
ttgcaagccgcgagtgaacacagcacgctgtctatgggcttatccgaaggtgagtttctg
ccttttgcggcggcttggccagccgtacgtgagcattacctggattggtgtgaaacccat
gacaggacgaacgccaggtttgccagcgcagagacttcgcacacccaaaacctcggcccc
attactttggttgggcgtatagaccgcatcgacacactgcctgatggcagccattgggtc
atggactacaagacagagcctatggctaagactcaggcgcgtatcaaagaccccttcgaa
gacacacaaatcgcgttctatgcggcgctgctacccgacgacaccttggatgcggcctac
gtgaacatcagcgagcgggacgccacgcgtactgtgccgcaagctgacatagtgcaagcg
cgtgacgctttgctggaggccattctggaagacatgacgcagattcaatccggcgcagct
ttgcctgcgctgggggagggcatggcatgtgattactgcaaagcacgtggactatgccgt
aaagacttttgggaggccccatga
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