Rhodoferax aquaticus: EXZ61_19355
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Entry
EXZ61_19355 CDS
T06176
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rhg
Rhodoferax aquaticus
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhg03009
]
EXZ61_19355 (dbpA)
Enzymes [BR:
rhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EXZ61_19355 (dbpA)
Ribosome biogenesis [BR:
rhg03009
]
Prokaryotic type
rRNA helicases
EXZ61_19355 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDL56144
UniProt:
A0A515ETZ3
LinkDB
All DBs
Position
4198571..4199995
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AA seq
474 aa
AA seq
DB search
MNTNTTPTQGQAESGPSFATLALSPAVLANLEQLGYKDMTAIQAASLPTALAGKDLIAQA
KTGSGKTAAFALALLAKLNPRYFAVQAAVLCPTRELADQVTTEIRRLARAEENIKVVTLC
GGIALRGQRASLEHGAHIVVGTPGRIMDHLERGYLNLDALQTLVLDEADRMLDMGFFDDI
ATVTKQCPKERQTLLFSATYPEGIEKLAKQFMREPVQVKVESQHAQALIEQRFYEVTREN
RLQTVAQLLNHFRPVSTLAFCNTKQQCKDLVTYLQDQGFIALALYGELEQRERDQVLAQF
ANRSCSVLVATDVASRGLDIAQLEAVINVDITPDPEVHVHRIGRTGRAGEAGLALSLASM
HDMGSVGKIEQYQKQSSVWHKLDTLTPSGKGPLTPPMATIQILGGRKEKVRPGDVLGALT
GTEGGEAYTREHIGKIQVTEFCTFVAVQRNLAHAACAKLNAGKVKGKSVKARVM
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaacacgacacccacacagggccaggccgagagcggcccttcttttgcaact
ttggccttgagccccgcggtcttggccaacttggagcaactgggttacaaagacatgacc
gccattcaggccgccagcctgcccaccgccttggctggcaaagacctgattgcccaggcc
aaaactggcagcggcaagaccgccgcatttgccttggccctgttggccaaactcaacccc
cgctactttgcggtgcaagccgcggtgctgtgccccacgcgtgagctggccgaccaagtc
accaccgaaatacgccgcttggcgcgcgcggaagaaaacatcaaagtcgtcaccctgtgc
ggtggcattgcgctgcgcggccaacgtgcctctctagagcacggcgcgcacatcgtggtg
ggcacccccgggcgcatcatggaccacttggagcgcggctacctgaacctggacgccttg
caaaccttggtgttggacgaagcagaccgcatgctggacatgggcttttttgacgacatt
gccaccgtgaccaagcaatgccccaaagagcgccaaaccctgttgttctcagccacctac
cccgagggtattgaaaagctggccaaacagttcatgcgcgagcccgtgcaggtgaaggtg
gagtcgcagcacgcgcaggccttgattgagcagcgcttttacgaagtcacccgcgagaac
cgcttgcaaaccgtggcccagttgctcaaccacttccgccctgtcagcaccttggcgttt
tgcaataccaagcagcagtgcaaagacctagtgacctatctgcaagaccaaggttttatc
gccttggccttgtatggcgagctagagcaacgtgagcgcgaccaggtgctggcgcagttt
gccaaccgcagttgctcggtgctggtggccaccgacgtggcctcacgcggcttggacatt
gcccagctggaagcagtgattaacgtggacatcacccctgaccccgaggtgcatgtgcac
cgcattggccgcaccggccgcgcaggcgaagcgggcttggcgctcagcttggccagcatg
cacgacatgggctcggtcggcaaaattgagcagtaccaaaagcaaagttcggtctggcac
aagctcgacaccctgacgcctagcggcaaaggcccgctgacaccgcccatggccaccata
caaatcttgggtgggcgcaaagaaaaagtgcgccccggtgatgtgctgggtgcactcaca
ggcaccgaaggcggcgaggcctacacccgcgaacacattggcaagattcaggtgactgag
ttctgcacctttgtggccgtgcagcgcaacctggcccacgcggcttgcgccaagctcaat
gcaggcaaggtcaagggcaagagcgtcaaagcccgggtgatgtag
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