Rheinheimera sp. D18: E0Z06_00500
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Entry
E0Z06_00500 CDS
T05923
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0Z06_00500 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhh03019
]
E0Z06_00500 (rhlB)
Enzymes [BR:
rhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E0Z06_00500 (rhlB)
Messenger RNA biogenesis [BR:
rhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E0Z06_00500 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SNF2-rel_dom
CMS1
Motif
Other DBs
NCBI-ProteinID:
QBL08096
LinkDB
All DBs
Position
107791..109071
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AA seq
426 aa
AA seq
DB search
MNKTHLTSHKFADFALAPQVLDALSAQGYGYCTPIQAQCLPLALAGKDIAGQAQTGTGKT
LAFLTATFHYLLTHEPKGSGQPRAIIMAPTRELAVQIHHDAKMMAEKSGLRLGLIYGGEG
YDTQRQLLENGVDILIGTTGRLIDYLKQGLYDLSQIQVVVLDEADRMFDLGFIKDIRFMF
NRMPPATERLSLLFSATLSYKVQELAFEKMNQPEHIHIAPEEMTGSRISEELFYPSDEHK
LPLLLTLMEEEWPDKAIVFANTKHWCEEVHAWLEADGHRVGLLTGDVIQKKRLRILEDFT
SGKLDILVATDVAARGLHIPKVSHVFNYDLPDDCEDYVHRIGRTGRAGESGKAISFACER
YALNLTAIEDYIRHPITVTQYDASGLLDDLKTPKPRVRRRAGQARTGSRPGAGRSSNASR
APRRPR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacacacttaacatcacataaattcgccgattttgcattggcaccacaggtt
cttgacgcattaagcgcgcaaggttacggctattgtacgcccattcaggctcaatgttta
cctttggcattagccggtaaagatattgccggtcaagctcaaacgggcacgggcaaaact
ttagcgtttttaaccgccacatttcactacctgcttacccatgaacctaagggttcaggt
cagccgcgcgccattataatggctcctacgcgagagttggctgttcagatccatcatgat
gcaaaaatgatggctgaaaaatcaggcctacgtcttggtttgatttatgggggtgaaggt
tatgatactcaacgccagctgttagaaaatggcgtagatattttaattggcactactggc
cgcttaattgattatttaaaacaaggtttatacgacctttcacaaattcaagttgtagta
ctagatgaagccgatcggatgtttgatctgggctttattaaagatattcgctttatgttc
aatcgtatgccaccggctactgagcgtttaagcttattgttttcagctaccttgtcttac
aaggtacaagagctggcatttgaaaaaatgaaccagccagaacatatccatattgcacca
gaggaaatgacaggtagccgcattagtgaagagttgttctacccttcagacgagcataag
ctgccattgttattaacgttaatggaagaagagtggccagataaagccattgtatttgcc
aataccaagcactggtgtgaagaagtgcatgcatggttagaagctgacggccatcgcgtt
gggttattaacgggcgatgttattcagaaaaaacgactgcgtattctagaagattttact
agcggtaaattagatattctggttgccaccgatgtagctgcgcgcggtttacacattcct
aaagtaagtcatgtatttaattatgacctacccgacgattgcgaagactatgtgcatcgt
ataggtcgtaccggccgtgcgggtgaaagcggtaaggcaattagctttgcctgcgagcgc
tatgcactgaaccttacagcaattgaagactatattcgccatccgattactgtaactcag
tatgatgccagcggtttgctggatgatcttaaaacgccaaaaccacgcgttcgtcgtcgt
gctggccaagctagaactggaagtcgcccaggcgctggacgtagtagtaatgcctcaaga
gccccacgtcgccctcgctaa
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