Rheinheimera sp. D18: E0Z06_01690
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Entry
E0Z06_01690 CDS
T05923
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhh03021
]
E0Z06_01690 (rapA)
Transcription machinery [BR:
rhh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
E0Z06_01690 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QBL08319
UniProt:
A0A4P6VQJ0
LinkDB
All DBs
Position
complement(337852..340764)
Genome browser
AA seq
970 aa
AA seq
DB search
MKFALGQRWISDTESDLGLGTIVALEGRHLTLLFPASGETRLYAQAEAPLTRVQFNVGDE
VASADDFKILVSAIKEQHDTLVYCGTRLDDGSYIELRETFLDHFISFNQPQDRLFAGQID
RFDWFSLRYQAWQHVHQQQQNPLRGLSGPRVSLIPHQLHIANEVAQRHAPRVLLADEVGL
GKTIEAGFIIHQQLISGLASRVMIVVPDSLQHQWLVEMLRRFNLHFSVFDQERCEQSALD
NPNPFDTEQLVLCSLSFLKNQPRWHQLATQSQWDLLVVDEAHHLQWSEDNPSEEYQRISD
LAQNTAGLILLTATPDQLGHESHFARLKLLDPARFHSYDAFLQEEQRYQHIATVAIPLLE
QRILTTAEAAALRQALTESDISSELKQINDVDASAELQAQARQRLLSQLLDHHGTGRILF
RNSRASVKGFPQRHAHLTPLVLPEQYQNALKVHFSLNPSLTEAQRIRANLFPEQVLQQLD
TNSNWWQFDPRVDYLLNLLKQHKHDKFLLICAHAETAIALEEAVRVREGIRAAVFHEGMT
ILERDKAAAYFAQEEYSAQLLVCSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDR
IGQREDIQIHLPYFTNHSQQVLLEWYQHGLNAIEHTCQTGRVVFEHFSPQLLSLLTQPNI
DTQLLANIIEQTQQLNAALKQKLEQGRDQLLEINSGGGAAAKALAEQLATQDNDTALPML
MFKAWDMLGINQDDRNDTSIILSHSEHMHCTSYPGLGDDGVTVTFDRATALAEEDIQLLS
WDHPMVRGTLDILTTEPHGSSSVAILVNKALPVGSYLLELNFIVEASAPATLQLNRYLPA
TPLRLLLDKNGNNLSENVSFEQLNKQLKPIGRQNASKLASALQTTVHPLIAKATSLAQTK
LDTIVGKAQQHAQQTLYEQQQRLVTLKKFNPSVRQDEINALHNQQLQIADYISKARLKLD
AIRLIVVSHD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgctctgggacaacgctggattagcgatacagaatccgatttaggtttaggc
actatagttgcgctggaaggccgtcatttaacacttttatttccagccagtggcgaaacc
cgcctttacgcccaagcagaagccccattaactcgggtacaatttaacgttggcgacgaa
gtggcaagcgctgatgattttaaaatactcgtcagtgccattaaagaacaacacgacacc
ttagtatattgcggtacgcgtttagacgatggcagctatattgagctaagagaaacattt
cttgatcactttattagctttaatcagccacaagatcgtttatttgccggccaaatagac
cgctttgattggtttagcttacgttatcaagcttggcagcatgtgcatcaacaacaacaa
aacccactacggggtttatctgggcctcgtgttagcttaattccacatcagttgcatatt
gctaacgaagtggcacagcgccatgcgccgcgtgtattgcttgccgatgaagtaggctta
ggcaagactattgaagctggttttattatacatcagcaactgattagcggccttgctagc
cgagtaatgattgtggtacccgattcattgcaacatcagtggctagtagaaatgctacgc
cgttttaacttgcacttttcggtatttgatcaagaacgctgtgaacagtcagccttggat
aaccccaatccgtttgatactgaacagctggtattatgtagtttatcattcttaaaaaac
caacctcgttggcaccaattagcaacacaaagccagtgggacttattggttgtggatgaa
gcgcaccacttacagtggagcgaggataacccaagtgaagaatatcaacgcattagcgac
ttagcgcaaaatacggcagggcttattctgttaacggccacacccgatcagttaggccat
gaaagccattttgccagattaaagctgctagaccctgctcgttttcatagctacgacgca
tttttgcaggaggagcagcgctaccagcatattgctactgtagctattccgctattagag
cagcgtattttaactactgcagaagctgccgcactgcgtcaagcgttaactgaaagcgat
attagtagtgagcttaaacaaataaacgatgtggatgctagcgcagaactgcaagctcaa
gctcgtcaacgattattgtctcagctgttagatcatcacggcactggccgtatactattt
cgtaatagtcgtgccagtgtgaaaggttttcctcagcgtcatgctcatctgaccccgctt
gtattaccagaacaatatcaaaacgcattaaaagtgcactttagccttaatccgtcactg
acagaagcccagcgaattcgggccaacttatttcctgagcaagtattacaacagcttgat
accaacagtaattggtggcaattcgacccacgtgttgactacttattaaacctattgaaa
caacacaagcatgataagtttttacttatctgcgctcatgccgaaaccgcaattgcgtta
gaagaagccgtgcgcgtgcgtgaaggtattcgtgccgctgtgtttcacgaagggatgaca
atactggaacgcgataaagccgccgcttattttgctcaagaagaatatagtgcacagtta
ttagtctgctcggaaataggtagtgaaggccgtaatttccagtttgcgcatcatttagta
ttatttgatttgccgctcaatccagatttattagagcagcgaattggccgtcttgaccga
attggccaacgtgaagatattcaaattcatttaccgtattttactaatcatagtcagcag
gtattgttggaatggtatcagcacgggttaaatgccatagaacatacgtgccaaactggc
cgtgtcgtatttgaacatttttccccccaattattgtcgctattaactcaaccaaatatc
gacacacaactacttgccaatattattgagcaaactcagcaactcaacgctgcattaaaa
caaaaattagagcaaggccgagatcaactgctggaaataaactctggtggtggcgccgca
gcaaaagcattggcagaacagctggcaacacaagataatgacaccgctctgcctatgtta
atgtttaaagcctgggatatgctgggtattaatcaagatgaccgcaatgatactagcatc
attctttcacactctgaacacatgcactgcaccagctatcctgggttaggtgatgatggt
gtaactgttacttttgatagagcaaccgcactagcagaagaagatattcaattattaagc
tgggaccatccaatggttcgcggtacgttagatattttgaccaccgagccccatggcagt
agctctgttgctattctagtaaacaaagcgctacccgttggcagttatttattagaatta
aactttattgttgaagccagtgctccagctacgttacaactgaatcgttacttacctgca
accccactacgcttactgctagataaaaatggcaataatctttctgaaaacgttagcttt
gagcaattaaataagcagctaaagccaattggccgacaaaatgcgagcaagctagccagc
gcattacaaactacagtgcaccccttaattgccaaggcaaccagcttagcgcaaaccaag
ttagatactattgtcggtaaagcacaacaacacgcgcagcaaacattgtatgagcaacaa
cagcgtttagttacgctaaaaaaatttaatccatcagtgcgccaagatgaaattaacgca
ttacacaatcaacaactacaaatagccgattacattagcaaagcacggttaaagctagat
gctattcggctaattgttgtaagccacgattaa
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