Rheinheimera sp. D18: E0Z06_02450
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Entry
E0Z06_02450 CDS
T05923
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0Z06_02450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhh03019
]
E0Z06_02450 (recQ)
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_02450 (recQ)
Enzymes [BR:
rhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0Z06_02450 (recQ)
Messenger RNA biogenesis [BR:
rhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E0Z06_02450 (recQ)
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E0Z06_02450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Vps16_C
HEM4
Motif
Other DBs
NCBI-ProteinID:
QBL08453
UniProt:
A0A4P6VNE3
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All DBs
Position
complement(510092..511915)
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AA seq
607 aa
AA seq
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MIQNLLSLLKQAFGYSEFRDGQLDVIQTALQGQDSFVLMPTGGGKSLCYQLPALMLPQVT
IVVSPLMSLMKDQVDALKANGIAAEFVNSSLNRDEVLQVFSRLRRGELKLLYVAPERLLQ
PHFLERIVDVGVSLFAIDEAHCISQWGHDFRPDYMALALLKQRFPSVPVMALTATADAAT
RHDIIQQLNLQQPLVHVGSFDRPNIRYTVQEKFRPLEQVINYLQQQDGASGIIYCGSRRK
VDELTEQLKQRGFNAAAYHAGMSNDERNTVQDAFKRDDYQLIVATVAFGMGVNKSNIRFV
LHYELPRTIEAYYQETGRAGRDSLAAEAMLLFDPADIGKMKRWLDAEENTQRAEVTWQRF
LAMAAFAEAQTCRRLVLLNYFGEARQTPCGNCDTCLQPPQQFDGTELAQKALSCVYRVGQ
SFGMHHVIDVLRGGQNQKITELKHDQLSTWGIGKELSHDYWLSILRQLIHFGLLQQDITA
HSVLKLQPAARPVLRGETPLSLAVPRLQSVKREPDRLSKQQYDRALFARLKNLRKNIAKR
DDVPPFVVFSDASLIDMCQQLPTDNRSMLAISGVGQTKLARYGADFIDEISDYLAADNQP
PAGKLAK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgatacaaaatttgttgtcgttgttaaaacaagcatttggctatagcgaatttcgtgac
ggccagctagacgtgatccaaacggcattgcaaggccaagacagctttgtattaatgcct
actggcggcggtaaatcgttatgctatcaattgccggcattaatgctacctcaggtaact
attgtggtgtcgccgctaatgtcactgatgaaagatcaggtagatgcacttaaagctaat
ggtatagccgcagaattcgtcaacagcagcttaaaccgcgatgaagtattgcaggtgttt
tctcggttgcgccgtggtgaacttaagctactttacgttgcgcctgaacgcttattacaa
ccgcactttttagagcgcatagtcgacgttggcgttagcttatttgccattgatgaagca
cactgtatttcacagtggggccacgattttcgtccagactacatggcattggccctgcta
aagcaacgtttcccgtcggtgccggtaatggcgcttaccgccactgccgatgctgcaact
cgccatgatattatacagcagctcaacttacagcagcctttggtgcatgtgggcagcttt
gaccggcctaacattcgctacaccgtacaagaaaaatttcgccctcttgagcaggtaata
aattatttacagcagcaagacggcgccagtggcattatttattgtggctcgcggcgcaaa
gtagatgagctaacagaacagcttaaacaacgtggctttaatgccgcggcgtatcatgcc
ggcatgagcaatgacgagcgtaataccgtgcaagatgcgtttaagcgtgacgactatcag
ttaattgtcgccacagttgcctttggcatgggcgtaaataaatcgaacattcgttttgtt
ttacactacgaactgcctcgaaccattgaggcctattatcaagaaacaggccgagctggc
cgcgatagcctagccgccgaagccatgttgctatttgatcctgctgatatcggtaaaatg
aaacgctggttagacgcagaagaaaacacccagcgtgctgaagtaacctggcagcgattt
ttagccatggcggcttttgccgaagcgcaaacctgccgacgtctcgtgctgttaaattac
tttggcgaagccagacaaaccccctgtggcaactgtgatacctgcttgcaaccgccacaa
cagtttgacggtacagagttggcacaaaaagcactatcttgcgtatatcgggtaggtcaa
agctttggcatgcatcatgttatcgatgtactgcgtggcggccaaaatcaaaaaattacc
gaactaaagcacgaccaattatcaacttggggtattggcaaagaattaagccatgactat
tggctaagtatattgcgtcaacttattcactttggcctgctacagcaggatattaccgcg
cactcagtactaaaactacaaccagctgcacgccctgtgttacgtggcgaaacaccgctt
tcgctagccgttcctaggttacaaagcgtaaaacgcgagcctgatcgcctcagtaagcaa
caatacgatcgtgccttgtttgctcggttaaaaaacctgcgtaaaaacattgctaagcgc
gacgatgtgccaccttttgtggtatttagtgatgccagcttaattgacatgtgccaacaa
ctgccaaccgacaaccgcagtatgttagcaatatcaggtgtaggccaaactaagttagcc
cgctatggtgccgactttattgatgagattagcgactatttagcagcagataatcaaccg
ccagcaggcaagctggcaaagtaa
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