Rheinheimera sp. D18: E0Z06_03030
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Entry
E0Z06_03030 CDS
T05923
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhh03021
]
E0Z06_03030 (rpoH)
Transcription machinery [BR:
rhh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E0Z06_03030 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
GntR
2Fe-2S_thioredx
TAF
VpsR
Exo70_N
HTH_3
UPF0231
Motif
Other DBs
NCBI-ProteinID:
QBL08562
UniProt:
A0A4P6VUJ5
LinkDB
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Position
634012..634863
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AA seq
283 aa
AA seq
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MSDTAEMISLPVATSSSLEAYTHAVSSIAMLTADAERSLAERLHQNGDLEAARQLIMSHL
RFVVHIARSYSGYGLPVSDLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWIKAEIHEYVL
KNWRIVKIATTKAQRKLFFNLRKAKKHLGWFNQEEVKNVAESLGVAEHEVREMEARMSNY
DMPFDAPDENEEAAYTAPVYYLEDKASDLANRIEEDQWDTAAVDRLQAAMRTLDERSQDI
VRARWLDNNKLTLQELADRYSVSAERVRQLEKNAMKKLQAVLS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacagcagaaatgatctccttacccgtagcaaccagcagcagcttggaagcg
tacactcatgctgtcagttccattgccatgttaactgcagatgcagagcgcagcttggct
gaacgcttacaccaaaacggtgatttagaagctgcacgtcagctaattatgtcgcacttg
cgctttgtagtgcatattgctcgcagctattcaggttatggtttaccggtaagtgattta
attcaagaaggtaatattggtctgatgaaagcggtaaaacgctttgatccaaatgttggc
gtgcgcttagtatcatttgctgtgcactggataaaagccgagatccatgagtacgtgctg
aaaaactggcgcatagttaaaattgcgaccactaaagcgcaacgcaaattgttttttaac
ctgcgtaaagcgaaaaagcatttaggctggtttaatcaagaagaagtgaaaaacgttgct
gagtcgttaggtgttgcggagcatgaagtgcgtgagatggaagcacgtatgagcaactac
gacatgccgtttgatgctccagatgaaaacgaagaagcggcttacactgcgccagtgtat
tatttggaagataaagcatcagacttagcaaaccgtattgaagaagaccagtgggatacc
gcagcagttgaccgtctgcaagccgcaatgcgcacgcttgatgagcgtagtcaggatatt
gtgcgagcgcgttggttagacaataacaagttaaccctgcaagagttggctgaccgttat
agtgtttctgcggaacgcgtgcgtcagttagaaaaaaatgcgatgaaaaaattacaggct
gtactgagttag
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