Rheinheimera sp. D18: E0Z06_03970
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Entry
E0Z06_03970 CDS
T05923
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E0Z06_03970 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhh01007
]
E0Z06_03970 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhh03016
]
E0Z06_03970 (lysS)
Enzymes [BR:
rhh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
E0Z06_03970 (lysS)
Amino acid related enzymes [BR:
rhh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E0Z06_03970 (lysS)
Transfer RNA biogenesis [BR:
rhh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E0Z06_03970 (lysS)
Prokaryotic type
Other AARSs
E0Z06_03970 (lysS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QBL08731
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All DBs
Position
830591..832111
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AA seq
506 aa
AA seq
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MSDQPQQQEEIQDVNKLIAERKHKLAALRADGFMFPNDFRRDSISSDLIAKYDHLSKEEL
EQEKVTVSLGGRILTRRIMGKASFTTISDMGGKIQLYVARDSLPEGVYNDQFKKWDLGDI
IGATGHLFKTQTGELTVWLSDIRLLTKALRPLPDKFHGLTDNEARYRQRYLDLISNEQSR
NTFLVRSKTVAYIRRFFTDEGFLEVETPMLQAIPGGASARPFETHHNALDMQMFLRIAPE
LYLKRLVVGGFEKVFELNRNFRNEGVSTRHNPEFTMLEFYWAYADYNDLMDLTEKLFRGL
ALHVLGSTEVPYQGEVFDFGKPFARMSVTESILHYNPTVTAEQLATRESVAELAKSLGIE
VKANYGHGRILMEVFDELVETKLRHPTFITEYPAEVSPLARRNDHNPAITDRFEFFIGGR
ELGNGFSELNDAEDQAERFREQVAQKDAGDDEAMFYDEDFVTALEHGLPPTAGQGIGIDR
LVMLLADAASIRDVILFPHMRLQHEK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaaccacaacagcaagaagaaatacaggacgtaaacaaactgattgctgag
cgaaaacataagctggctgcgctgcgtgctgatggctttatgttcccgaatgattttcgc
cgtgacagcatatcaagtgatcttattgccaaatatgatcacttaagtaaagaagaatta
gagcaagaaaaagtaacggttagcctaggcggtcgtattcttactcgccgtattatgggt
aaagccagctttacaactatctccgatatgggcggcaaaattcagttatatgtagcacgc
gacagcctgcctgaaggtgtatataacgaccagtttaaaaagtgggatttaggcgacatt
attggtgcaactgggcatttatttaaaactcaaactggcgagctaacagtatggttaagt
gacattcgcctgctaaccaaagcgctgcggccactacccgataagtttcatggcttaacc
gataacgaagcgcgttaccgccagcgttacctcgatttaatttcgaatgagcaatcacgt
aatacctttttagtgcgtagcaaaaccgtagcctatattcgccgtttctttactgacgaa
ggctttttagaagtagaaacgccaatgctgcaagctattcctggtggtgcttcggcacgc
ccatttgaaacccaccacaacgcgctagatatgcagatgtttttgcgtattgctcctgag
ctgtatttaaagcgtttagtggttggcggctttgaaaaggtgtttgagcttaaccgtaat
ttccgtaacgaaggcgtatctactcgacataatccagaatttaccatgttagagttttac
tgggcctatgccgattacaacgacttaatggacctaactgaaaagttattccgtggttta
gcgctgcacgttttaggtagtactgaagtgccgtatcaaggcgaagtgttcgactttggt
aagccctttgcacgcatgtcggtaaccgaatctattttgcactacaacccaacagttaca
gcagaacaacttgctactcgcgagtcggtagctgagctggcaaaaagtttaggcattgaa
gttaaagctaactatggccatggtcgtattttaatggaagtatttgatgaattggtagaa
accaagttacgtcatcctacttttattaccgaatacccagctgaagtatcaccgctggcg
cggcgtaacgaccataacccagctattaccgaccgctttgagttctttattggtggtcga
gagctaggtaacggttttagcgaattaaacgacgctgaagatcaagctgaacgttttcgc
gagcaggtggcacaaaaagatgccggcgacgatgaagcgatgttttatgatgaagacttc
gttaccgcattagagcacggtttaccgccaacagctggccaaggtataggtattgaccgc
ttggttatgttgcttgctgacgcggcatcaattcgtgacgttattctgtttccgcatatg
cgtttacagcacgaaaaataa
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