Rheinheimera sp. D18: E0Z06_04260
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Entry
E0Z06_04260 CDS
T05923
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhh03016
]
E0Z06_04260 (truD)
Enzymes [BR:
rhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E0Z06_04260 (truD)
Transfer RNA biogenesis [BR:
rhh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E0Z06_04260 (truD)
Prokaryotic type
E0Z06_04260 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBL08783
UniProt:
A0A4P6VP27
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All DBs
Position
884707..885750
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AA seq
347 aa
AA seq
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MINNKPLAYLYAEPTATALLRQQADDFIVDEQLNFSPSGAGEHVLLQIEKIGQNTQYVAK
QLATLTGLRARDISYAGLKDRHAVTRQWFCFKWPIKQELDWQSWQLEGCKILDMQRHYRK
LRLGALKANLFKIRLREVSNAADVLKRAELLLDGVPNYYGEQRFGINGGNLVLAEQLFSG
QSITDRKLRGLALSAARSFIFNQQVAARINHGLFNQIVDGDVLQLDGSGSVFRAAQTDSA
LQQRLTEKDLHITAVLAGIGEPMVSATAAEFEQQVLAQYASLVQGLEDYRLKVERRAIRL
VPQQLAIQQQGADINLSFALPAGCFATSVLRELVNYRDCGRQAAALE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgattaacaataaacctttagcctatttatatgctgaaccgacagctaccgcgttacta
cgccagcaagctgatgattttattgtcgatgaacagctaaactttagccccagtggtgct
ggcgaacatgtgctgctgcaaattgagaaaataggccagaatacccaatacgtagccaag
cagttggcaacgttaacggggctgcgcgcccgcgatattagctatgccggtttaaaagat
cgacatgcggtaactaggcagtggttttgctttaaatggccgattaaacaagaactcgat
tggcaaagttggcagcttgaagggtgtaaaatcctcgatatgcagcgccattatcgtaag
ttacgtttgggcgctttaaaagcgaatctatttaaaattcgcctgcgcgaggtatctaac
gctgctgatgtgcttaaacgcgcggagctattgctagacggtgtacctaactattatggt
gagcagcgctttggcatcaatggtggtaatttagtgctggctgagcagctatttagtggt
caaagtattaccgatcgcaagttacgcggcttagccttgtcggcagcccgatcttttatc
tttaaccagcaagtggcggcgcgtattaaccatgggttatttaaccaaatagtagatggt
gatgtgctacaactggatggttcaggttcggtatttcgcgcagcgcaaactgatagtgcg
ttgcagcaacgtttgactgaaaaagacctacatataaccgcagtacttgctggcattggc
gaacctatggttagcgcaaccgccgctgaatttgagcagcaagtgttagctcagtatgcc
tcgttagtgcaagggctagaagattaccgcttaaaagtagaacgcagagccattaggcta
gtgccacaacagttggcgatacagcagcagggcgcagatattaaccttagctttgccctg
cctgcaggttgctttgcgactagcgtgctgcgcgagttagtgaattatcgtgattgcggc
cgtcaagcggcggcattggagtag
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