Rheinheimera sp. D18: E0Z06_05105
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Entry
E0Z06_05105 CDS
T05923
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhh03032
]
E0Z06_05105
03036 Chromosome and associated proteins [BR:
rhh03036
]
E0Z06_05105
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_05105
DNA replication proteins [BR:
rhh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E0Z06_05105
Chromosome and associated proteins [BR:
rhh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E0Z06_05105
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E0Z06_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_1
VWA_3
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
QBL08931
LinkDB
All DBs
Position
1068194..1068466
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDSFIDAVTEALKEGDSVALVGFGTYSVRERAARTG
RNPQTGATIQIAAAKIPSFKPGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcaacttatcgacaaaattgctgctggtgcagacatttctaaagcagca
gcaggtcgtgctttagattcgttcattgatgctgttaccgaggctcttaaggaaggcgac
tctgtagcattagttggttttggtacatacagtgtacgtgagcgtgcagcccgtactggc
cgtaacccgcaaactggtgcaactattcaaatcgctgctgcgaaaattccttcttttaag
ccaggtaaagcattaaaagacgcctgtaactaa
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