Rheinheimera sp. D18: E0Z06_06705
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Entry
E0Z06_06705 CDS
T05923
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_06705 (phrB)
Enzymes [BR:
rhh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E0Z06_06705 (phrB)
DNA repair and recombination proteins [BR:
rhh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E0Z06_06705 (phrB)
Prokaryotic type
E0Z06_06705 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBL09227
LinkDB
All DBs
Position
1412442..1413887
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AA seq
481 aa
AA seq
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MNSLNLVWLRNDLRSYDNVCLHSAIEHAKRTASQVLVLFIATPDTWQLHDMAAIKQDLLR
RRVLQLQQELAELAIPLLAIEGSSYADTPQIFAALSKRFVLNVFLQTEYELREQQRDAAV
EQLVLSSGGQFIRFDSQCIMPPGAIRTQQGAIYRVFTPFKRTWLSALHSQGVTCYPRPKT
IEQAALMLPEFTPMQTGDNSSVDWPVAEQDVLNLLRAFCREKVANYTNARDYPAIAGTSK
LSAYLAIGVVSAAQCVARLQMEMKDSWQQDKSGAEVWLSELIWREFYKHILVAYPNLIKH
QPFQIETNGIRWSNNQALFQAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMITASFLVKD
LHIDWRWGERYFMSKLIDGEFAANNGGWQWAASTGTDAVPYFRIFNPTSQSEKFDPSGEF
IRLYVPELRHLKEKSIHWPHNNGLVLAYPAPIVDHAVARKYTLELFAEVKNRYEHSANTT
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcctaaacctcgtgtggttacgtaatgacttacgcagttatgataacgtctgt
ttacacagtgcaatagagcatgcaaagcgcactgcaagccaagtattagtcttgtttatt
gctactccagatacctggcagctgcatgacatggcagcaataaaacaagatttgcttcga
cgtcgagttttgcaattacagcaagaacttgccgagcttgctatacctttactcgcgatt
gaaggtagcagctatgcggataccccgcagatatttgctgcgctaagtaagcgctttgta
cttaacgtttttctacaaacggaatacgaactacgcgagcaacagcgcgatgctgctgta
gaacagctggtattaagctcgggcgggcagtttatccggtttgatagccaatgcattatg
ccgccaggcgctatacgcacgcagcaaggggcgatatatagagtatttacgccatttaag
cgtacctggctaagcgccttacacagtcaaggtgtgacgtgttatcccagacctaaaact
attgagcaagcagcattaatgctccctgagtttacgccaatgcagaccggtgataatagc
tcggtcgattggccagttgcagagcaagacgtgcttaatttactgcgcgcgttttgtcga
gaaaaggtagccaattacaccaatgcacgggattatcccgccattgctggcacatcaaag
ctgtcggcgtatttagctatcggtgtggtgtcagccgcacagtgcgttgctagattacaa
atggaaatgaaagacagttggcagcaggataaaagcggcgccgaggtctggctatcagag
cttatttggcgtgaattttataaacatatattagtcgcttacccaaatctaattaagcat
cagccgtttcagatagaaacaaacggcatacgctggagtaataatcaggcattatttcaa
gcgtggtgtgaaggtaaaaccggctacccgatagttgatgcggcgatgcgccaactcaac
caaaccggttggatgcataatcgattacgcatgattaccgctagctttttggtaaaagac
ttacatatcgattggcgttggggcgagcgctactttatgtcaaaactgattgatggtgaa
tttgcagctaataatggtggctggcagtgggcagcctctaccggtaccgatgccgtacct
tactttagaatatttaacccaaccagccaaagtgagaagtttgatccaagcggcgagttt
atacgtttatacgtacctgaactgcgtcatctgaaagaaaaatcgatacattggccgcat
aataatggactggttttggcgtatcccgcaccaattgtcgatcatgccgtagcacgtaaa
tatacactcgaactttttgcagaggtaaaaaatcggtatgaacacagcgccaacaccacg
cattga
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