Rheinheimera sp. D18: E0Z06_07485
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Entry
E0Z06_07485 CDS
T05923
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhh03000
]
E0Z06_07485
Transcription factors [BR:
rhh03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
E0Z06_07485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_23
DUF3489
Sigma70_r4
CENP-B_N
DUF6362
HTH_40
HTH_28
HTH_24
HTH_10
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QBL09359
LinkDB
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Position
complement(1578998..1579642)
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AA seq
214 aa
AA seq
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MDKFMKLIVLTEQDAQHSLTLLARSAGIDVEQKTKLDILYSGTIKARTLVAYPYSTIDWN
KHGLSPELEYLLQKTSVCLFQTERLLVNAQQAVFAGLRGIIYRDEQPNRILTALKTMMQG
ELYYARTVMSELLDELLQQKRLEKKAPLCLPDNNLLTKQEKRIIQLVAEGARNKEIAENL
AISAHTVKAHLASVFRKTQARNRVELLRWCNVIK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggataagttcatgaaacttatcgtacttacagagcaagatgcgcagcatagtcttacg
ttattagcaaggtcggcaggcattgatgtagagcaaaaaaccaaactagatatcttgtat
tctggcactataaaagctcgcaccttagtggcttatccgtattctacaattgattggaat
aaacatggtttgtcgcccgagcttgagtatttattgcaaaaaacatcggtatgcttattt
caaactgaacggctgttagttaacgcacaacaagccgtttttgccggccttaggggtatt
atataccgcgacgagcaaccgaaccgaatattaacggcattaaaaaccatgatgcagggt
gaactctattatgctcgtaccgtaatgtctgagctattagatgaattgctgcagcaaaaa
cggctagaaaaaaaggcgccgctttgcctaccagataacaacttactaaccaagcaagaa
aaacgtattattcaactcgttgcagaaggtgcgcgcaataaagaaattgctgaaaatttg
gctattagcgctcacacggttaaagcgcatctagcctcggtatttcgcaaaacgcaggcc
cgaaaccgagtagagctattacgttggtgtaatgtaattaaatag
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