Rheinheimera sp. D18: E0Z06_07755
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Entry
E0Z06_07755 CDS
T05923
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhh03032
]
E0Z06_07755 (ihfB)
03036 Chromosome and associated proteins [BR:
rhh03036
]
E0Z06_07755 (ihfB)
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_07755 (ihfB)
DNA replication proteins [BR:
rhh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E0Z06_07755 (ihfB)
Chromosome and associated proteins [BR:
rhh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E0Z06_07755 (ihfB)
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E0Z06_07755 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
NGO1945_C
Motif
Other DBs
NCBI-ProteinID:
QBL09409
UniProt:
A0A4P6VTC5
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All DBs
Position
1643180..1643464
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AA seq
94 aa
AA seq
DB search
MTKSELIEKLATDFPHIQVKDVEASVKEILEQMAQSLAGNERIEIRGFGSFSLHYRAPRI
GRNPKTGDKVELDGKYVPHFKPGKELRDRVKDNT
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaaaaattagctactgatttcccccatattcaggttaag
gatgttgaggcttcagttaaagaaatcctcgaacaaatggcacaatcgttagcgggtaac
gaacgtattgaaattcgtggttttggtagtttttcactgcactatcgcgcaccaagaatt
ggccgtaaccctaaaactggtgacaaagttgaactagacggtaaatatgtaccgcatttc
aaaccaggaaaagagctgcgtgaccgcgtaaaagataatacctga
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