Rheinheimera sp. D18: E0Z06_08175
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Entry
E0Z06_08175 CDS
T05923
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rhh
Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhh03009
]
E0Z06_08175 (rluC)
Enzymes [BR:
rhh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
E0Z06_08175 (rluC)
Ribosome biogenesis [BR:
rhh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E0Z06_08175 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
QBL09485
LinkDB
All DBs
Position
complement(1724858..1725811)
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AA seq
317 aa
AA seq
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MTDEIKLPVQIVEIEPDFIGQRIDNFLLARLKGVPKSVIYRVLRKGEVRVNKKRIKPEYK
LQQDDVVRIPPLTVAPEGEPISIKLSMVKNLEQHILFEDNDLIVLNKPSGMAVHGGSGLQ
FGVIEALRALRPLAKHLELVHRLDRDTSGCLLIAKKRSVLTHLHEQLRNKTVEKKYWALV
AGDWDNRVRKVTERLKKNTLQSGERVVRVDEAEGKESETRFRILQRYQEGTLVEAFPVTG
RTHQIRVHTACKGHPIACDDKYGDNTFTAQMQKIGLNRLFLHAKSLSFIHPNTETTMRIE
APLDPSLEQALTRLTRK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaaatcaagttacctgtgcaaatagttgaaatagaacctgattttattggt
cagcgtatagacaattttctgttagcacggctcaaaggcgtgcccaaaagtgttatttat
cgggttttgcgaaaaggagaggtgcgagtaaacaaaaaacgcattaaacctgagtataaa
ttacaacaagatgatgtggtacgtattccgccattaaccgtggcacctgagggtgagccg
atatcgataaagttgtcgatggtgaaaaatttagagcaacatattttatttgaagataac
gatttaattgtgctgaataagccatcaggcatggcagtgcatggcggtagcggtttgcaa
tttggtgtaatagaagccttacgtgcgcttaggccgttggcaaaacatttagagttggta
catcgcttagatcgcgatacgtcaggttgcttgttaattgccaaaaagcgctcagtactt
acgcatttgcatgaacaattgcgtaataaaactgtagaaaaaaaatattgggccttagtt
gctggcgattgggacaaccgcgtacgcaaggttactgagcgattaaagaaaaataccctg
caatctggcgagcgagtagtgcgagttgatgaagctgagggaaaggagtcagagactcgg
tttcgtattttgcagcgctatcaagaaggcaccttagttgaggcatttccggtaactggc
cgcacgcaccaaattcgtgtgcacacggcatgtaaaggccacccaatagcttgtgatgat
aaatacggcgataacacctttaccgcacaaatgcagaaaataggcttaaatcggctattt
ttacatgctaaaagtttgagctttattcaccctaataccgaaacaacaatgcggatagaa
gcacctttggaccctagcttagaacaagcactgacaagattaacgagaaagtaa
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