Rheinheimera sp. D18: E0Z06_08395
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Entry
E0Z06_08395 CDS
T05923
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E0Z06_08395 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhh02000
]
E0Z06_08395 (msbA)
Enzymes [BR:
rhh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
E0Z06_08395 (msbA)
Transporters [BR:
rhh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E0Z06_08395 (msbA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
Glyco_hydro_18
AAA_29
AAA_25
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QBL09526
LinkDB
All DBs
Position
complement(1771436..1773196)
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AA seq
586 aa
AA seq
DB search
MTASPTIKQRSFRRLLSYVKPYRWGFIAAAIGMLGYALVDVYFVSQLKDFIDVGINQKNT
DYLRFAPIFIVIIFILRGVFNFIASYCLNWVGTHVVQEMRQQLFQHLMRLPVSFHDQHST
GDLISKITYNTEQIKQTTSRALAVLIREGAFVLGLLVVMFWNSWQLSSIFILIAPIIAVI
VSFVSKRFKLLSQNIQNAMGEVTTCSEQMLNGHKVILSFGGQEIESKRFFKVNNITRRQD
VKMEATRSISVSSIQIIASFALAFVIYMASFPEMLDSLTAGKFTTIVGSMMMLLRPLKQL
TTVNSEFQRGLTAADSVYLILDQPAEQDTGSHVLADIKGEICFKHVNFSYPGHEQQVLHD
ISFTAPAGKTVALVGRSGSGKTTISSLLPRFYDVLDGDITLDGIPIKSCTLASLRQKMAV
VSQHVTLFNDTIANNITYGFTEPVSLQRLQDVAEKAHVMEFAANLKDGLDTMIGENGVSL
SGGQRQRIAIARALLREAPILVLDEATSALDTESERKIQAALNELLKDRTSIVIAHRLST
IENADIIIVMDQGRIIEQGDHHSLLQQDGAYAQLYKLQFGSEQTAV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
ttgacggcttcacccactataaagcagcgcagctttcgccgattactgtcttatgtaaaa
ccgtaccgttggggctttattgccgccgctattggcatgcttggctatgcgttagttgat
gtgtattttgtttcacaattaaaagactttattgatgttggtattaatcaaaaaaatact
gactacttgcgctttgcaccgatttttatcgtcattatttttatcttacgcggcgtattt
aattttatcgccagctattgcttaaactgggttggcacgcatgtagtgcaagaaatgcgg
cagcaactatttcaacatctaatgcgcttacccgttagttttcatgatcaacattctact
ggtgatttaatttctaaaatcacctataacacggaacaaattaaacaaaccacatcgcgt
gcactggcggtattaattcgtgagggcgcctttgtactgggtttattggtggtaatgttt
tggaacagctggcagttatcgtcaatctttattcttattgcgccaatcattgcggttatc
gtcagttttgtgtcaaagcgttttaaattattaagtcaaaacattcaaaacgccatggga
gaggtgacaacctgctcagagcaaatgcttaacggccacaaggtaattttatcttttggt
gggcaagaaattgaaagtaaacgctttttcaaagttaataatataactcgccgtcaagac
gtgaaaatggaagcaacacgttctattagcgtgtcgtcaattcaaattattgcgtctttt
gccctggcctttgttatttatatggccagttttcctgagatgttagatagtttaaccgcc
ggaaaattcaccaccattgttggttctatgatgatgttactgcggccattaaaacaatta
actacggtaaatagtgaatttcagcgaggtttaacggctgccgatagtgtgtatctgata
ttagaccaaccggcagaacaagatactggcagccatgttttagctgatattaaaggcgaa
atttgctttaaacacgttaatttttcctaccccggccatgagcagcaagtgttgcatgat
attagctttaccgcaccagctggtaaaactgtggcccttgtgggccgttctggtagcggt
aaaaccacaatatctagcttattaccgcgattttatgatgtgttagacggtgacattaca
ttagatggcatacccattaaaagttgtactttagcctctttacgtcagaaaatggctgtg
gtgtcgcaacatgtcaccttatttaatgacactatagccaacaatattacctatggtttt
accgagccggtttcgttgcaacgtttgcaagatgttgcggaaaaagcccatgttatggag
tttgccgctaacctaaaagatggcttagataccatgattggtgaaaacggcgttagcttg
tcaggtgggcaacgccagcgtattgctattgcacgtgctttattacgtgaggcgcctatt
ttggtgctggacgaagcgacatctgcactggataccgagtcagagcggaaaattcaggcg
gcactgaacgagttgttaaaagatcgcactagcattgtgattgcgcatcgtttatctacc
attgaaaacgccgatattattatcgttatggatcaaggccgcattatagagcagggtgat
catcacagtttattgcaacaagatggtgcctacgcacagctatataaactgcaatttggt
tctgaacaaacagcggtataa
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